zinc finger and SCAN domain containing 18

 jump to detail

Synonym

Zinc finger protein 447, MGC2427, MGC8682, zinc finger protein 447, ZNF447, DKFZp586B1122, MGC4074, FLJ44152, FLJ12895

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:296.30 cerebellum:251.90 brain stem:- corpus callosum/glia:320.80 pineal gland:296.70 peripheral nerve:30.70 spine:336.90 retina:- eye:88.20 artery/aorta:30 vein:- lymphnode:20.20 peripheral blood:18.20 spleen:245.80 thymus:180.40 bone marrow:59 adipose:- bone:89.60 skin:52.80
GeneChip cerebrum:8.22 cerebellum:8.09 brain stem:8.25 corpus callosum/glia:8.25 pineal gland:- peripheral nerve:7.57 spine:8.17 retina:- eye:- artery/aorta:7.58 vein:7.23 lymphnode:7.05 peripheral blood:- spleen:7.49 thymus:7.03 bone marrow:5.70 adipose:7.20 bone:- skin:6.74
CAGE cerebrum:4.00 cerebellum:- brain stem:3.75 corpus callosum/glia:3.86 pineal gland:3.83 peripheral nerve:- spine:3.67 retina:- eye:- artery/aorta:3.86 vein:3.29 lymphnode:2.99 peripheral blood:- spleen:2.70 thymus:2.73 bone marrow:- adipose:2.81 bone:- skin:-
RNA-seq cerebrum:3.47 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.58 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:227.80 placenta:127.50 prostate:180.20 ovary:- testis:82.20 heart:63.90 muscle:120.50 esophagus:342.80 stomach:21.20 intestine:194.40 colon:17     liver/hepato:10.60        lung:88    bladder:251.20 kidney:156 pituitary:232 thyroid/parathyroid:982.50 adrenal gland:355.50 pancreas:17.80 breast:37.20 salivary:-
GeneChip uterus:7.86 placenta:7.63 prostate:7.95 ovary:7.80 testis:7.84 heart:7.48 muscle:6.33 esophagus:6.90 stomach:7.06 intestine:7.05 colon:7.03 liver/hepato:6.31 lung:7.33 bladder:- kidney:7.73 pituitary:8.76 thyroid/parathyroid:8.55 adrenal gland:7.27 pancreas:6.26 breast:7.61 salivary:6.80
CAGE uterus:3.58 placenta:3.46 prostate:3.59 ovary:3.79 testis:3.70 heart:3.69 muscle:3.23 esophagus:3.21 stomach:- intestine:2.53 colon:3.33     liver/hepato:1.66    lung:3.34 bladder:3.57 kidney:2.80 pituitary:3.60 thyroid/parathyroid:3.79 adrenal gland:- pancreas:2.94 breast:3.27 salivary:2.66
RNA-seq uterus:- placenta:- prostate:3.37 ovary:4.11 testis:3.19 heart:2.11 muscle:1.33 esophagus:- stomach:- intestine:- colon:2.77     liver/hepato:0.32        lung:2.58    bladder:- kidney:1.76 pituitary:- thyroid/parathyroid:3.93 adrenal gland:2.65 pancreas:- breast:2.32 salivary:-

Gene Information

IDs

Refseq ID NM_001145543
Gene ID 65982
Unigene ID Hs.235390
Probe set ID 218312_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000121413
GTEx ID ENSG00000121413

Orthologous Gene

Mouse[1]  NM_001017955
Rat[1]  NM_001017955

Chromosomal Region

19q13.43  [58,595,212  -  58,629,793]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16344560
20211142
21832049
21890473
21988832
22939629
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006366  transcription from RNA polymerase II promoter

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0046872  metal ion binding