SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

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Synonym

BAF155, SMARCC1, Rsc8, BRG1-associated factor 155, SWI/SNF complex 155 kDa subunit, SRG3, CRACC1, SWI3

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:46.20

cerebellum:12.60

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:61.30

spine:112.30

retina:118.60

eye:64.60

artery/aorta:60

vein:-

lymphnode:111.20

peripheral blood:36.40

spleen:18.90

thymus:51.50

bone marrow:98.40

adipose:121

bone:64

skin:120

GeneChip

cerebrum:6.06

cerebellum:5.66

brain stem:6.07

corpus callosum/glia:6.83

pineal gland:-

peripheral nerve:6.39

spine:6.51

retina:-

eye:-

artery/aorta:6.87

vein:6.50

lymphnode:7.24

peripheral blood:-

spleen:7.08

thymus:8.02

bone marrow:6.68

adipose:6.38

bone:-

skin:7.25

CAGE

cerebrum:2.91

cerebellum:-

brain stem:3.29

corpus callosum/glia:3.58

pineal gland:2.76

peripheral nerve:-

spine:3.19

retina:-

eye:-

artery/aorta:3.42

vein:3.56

lymphnode:3.57

peripheral blood:-

spleen:3.47

thymus:4.21

bone marrow:-

adipose:3.40

bone:-

skin:-

RNA-seq

cerebrum:2.41

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.56

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.82

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:154.90

placenta:91.10

prostate:112.60

ovary:74.50

testis:121.10

heart:102.20

muscle:80.40

esophagus:-

stomach:233.70

intestine:97.20

colon:229

liver/hepato:63.30

lung:73.30

bladder:-

kidney:62.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:26.70

breast:204.40

salivary:-

GeneChip

uterus:7.30

placenta:7.09

prostate:7.73

ovary:7.13

testis:7.31

heart:6

muscle:5.87

esophagus:7.08

stomach:6.93

intestine:6.89

colon:6.76

liver/hepato:6.38

lung:6.47

bladder:-

kidney:6.96

pituitary:6.55

thyroid/parathyroid:7.40

adrenal gland:6.16

pancreas:6.78

breast:7.62

salivary:6.80

CAGE

uterus:3.61

placenta:3.84

prostate:3.75

ovary:3.36

testis:3.57

heart:2.86

muscle:3.00

esophagus:3.57

stomach:-

intestine:3.46

colon:3.61

liver/hepato:3.19

lung:3.27

bladder:3.70

kidney:3.23

pituitary:3.16

thyroid/parathyroid:3.57

adrenal gland:-

pancreas:3.65

breast:3.16

salivary:3.53

RNA-seq

uterus:-

placenta:-

prostate:4.69

ovary:4.34

testis:4.61

heart:2.72

muscle:3.96

esophagus:-

stomach:-

intestine:-

colon:4.59

liver/hepato:2.51

lung:3.73

bladder:-

kidney:3.79

pituitary:-

thyroid/parathyroid:4.35

adrenal gland:3.77

pancreas:-

breast:3.76

salivary:-

IDs

Refseq ID	NM_003074
Gene ID	6599
Unigene ID	Hs.476179
Probe set ID	201074_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000173473
GTEx ID	ENSG00000173473

Orthologous Gene

Mouse[2]	NM_009211
Rat[1]	NM_001106861

Chromosomal Region

3p21.31 [47,626,762 - 47,823,596]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000953	Chromo domain
IPR009057	Homeodomain-like
IPR012287	Homeodomain-related
IPR017877	MYB-like
IPR001005	SANT, DNA-binding

GO:0006338	chromatin remodeling
GO:0008286	insulin receptor signaling pathway
GO:0007399	nervous system development
GO:0006337	nucleosome disassembly
GO:0009887	organ morphogenesis
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006351	transcription, DNA-dependent

GO:0005730	nucleolus
GO:0005634	nucleus
GO:0016514	SWI/SNF complex
GO:0001741	XY body

GO:0003682	chromatin binding
GO:0003677	DNA binding
GO:0005515	protein binding
GO:0047485	protein N-terminus binding
GO:0003713	transcription coactivator activity

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function