SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)

Synonym

SMT3H1, SMT3 suppressor of mif two 3 homolog 3 (yeast), SMT3 homolog 1, Small ubiquitin-related modifier 3 precursor, SUMO-3, Ubiquitin-like protein SMT3A, SMT3A, SUMO3

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:142.20

cerebellum:365.20

brain stem:-

corpus callosum/glia:-

pineal gland:296.70

peripheral nerve:337.40

spine:112.30

retina:-

eye:141

artery/aorta:149.90

vein:199.90

lymphnode:141.50

peripheral blood:127.50

spleen:75.60

thymus:77.30

bone marrow:59

adipose:201.70

bone:102.40

skin:134.40

GeneChip

cerebrum:8.84

cerebellum:9.04

brain stem:8.92

corpus callosum/glia:8.03

pineal gland:-

peripheral nerve:8.91

spine:8.69

retina:-

eye:-

artery/aorta:8.21

vein:8.31

lymphnode:8.65

peripheral blood:-

spleen:8.71

thymus:8.55

bone marrow:8.42

adipose:8.69

bone:-

skin:8.64

CAGE

cerebrum:3.97

cerebellum:-

brain stem:3.74

corpus callosum/glia:3.49

pineal gland:4.01

peripheral nerve:-

spine:3.61

retina:-

eye:-

artery/aorta:3.80

vein:3.51

lymphnode:3.86

peripheral blood:-

spleen:3.92

thymus:3.61

bone marrow:-

adipose:3.68

bone:-

skin:-

RNA-seq

cerebrum:5.72

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.39

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.33

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:91.10

placenta:149.40

prostate:101.40

ovary:260.80

testis:199

heart:217.10

muscle:20.10

esophagus:1028.50

stomach:21.20

intestine:97.20

colon:84.80

liver/hepato:52.80

lung:156.40

bladder:-

kidney:156

pituitary:-

thyroid/parathyroid:163.70

adrenal gland:253.90

pancreas:62.20

breast:55.80

salivary:-

GeneChip

uterus:8.43

placenta:8.42

prostate:8.94

ovary:8.77

testis:8.70

heart:8.35

muscle:9.11

esophagus:8.59

stomach:8.36

intestine:8.56

colon:8.58

liver/hepato:8.23

lung:8.59

bladder:-

kidney:8.72

pituitary:8.14

thyroid/parathyroid:9.02

adrenal gland:8.31

pancreas:7.75

breast:8.95

salivary:8.70

CAGE

uterus:3.38

placenta:3.61

prostate:3.66

ovary:3.74

testis:3.63

heart:3.92

muscle:4.04

esophagus:3.78

stomach:-

intestine:3.78

colon:3.71

liver/hepato:3.86

lung:3.93

bladder:3.55

kidney:3.56

pituitary:3.41

thyroid/parathyroid:3.76

adrenal gland:-

pancreas:3.40

breast:3.81

salivary:3.58

RNA-seq

uterus:-

placenta:-

prostate:5.35

ovary:5.78

testis:5.74

heart:5.16

muscle:4.58

esophagus:-

stomach:-

intestine:-

colon:5.11

liver/hepato:4.91

lung:5.72

bladder:-

kidney:5.30

pituitary:-

thyroid/parathyroid:6.15

adrenal gland:6.01

pancreas:-

breast:5.40

salivary:-

IDs

Refseq ID	NM_006936
Gene ID	6612
Unigene ID	Hs.474005
Probe set ID	200740_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000184900
GTEx ID	ENSG00000184900

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

21q22.3 [46,191,374 - 46,238,694]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000626	Ubiquitin
IPR019955	Ubiquitin supergroup

Gene Ontology (GO ID)

Biological Process

GO:0034504	protein localization in nucleus
GO:0016925	protein sumoylation

Cellular Component

GO:0005737	cytoplasm
GO:0000776	kinetochore
GO:0016604	nuclear body
GO:0005654	nucleoplasm

Molecular Function

GO:0005515	protein binding
GO:0019789	SUMO ligase activity

SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function