small nuclear RNA activating complex, polypeptide 1, 43kDa

 jump to detail

Synonym

snRNA-activating protein complex 43 kDa subunit, SNAPC1, polypeptide 1, snRNA-activating protein complex subunit 1, PTF subunit gamma, SNAPc 43 kDa subunit, PSE-binding factor subunit gamma, Small nuclear RNA-activating complex polypeptide 1, PTFgamma, SNAP43, SNAPc subunit 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:13 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:5.90 artery/aorta:30 vein:- lymphnode:10.10 peripheral blood:- spleen:18.90 thymus:- bone marrow:19.70 adipose:- bone:- skin:43.20
GeneChip cerebrum:4.07 cerebellum:3.81 brain stem:4.26 corpus callosum/glia:4.39 pineal gland:- peripheral nerve:4.81 spine:4.54 retina:- eye:- artery/aorta:4.73 vein:5.37 lymphnode:4.81 peripheral blood:- spleen:5.28 thymus:5.07 bone marrow:3.94 adipose:4.71 bone:- skin:4.37
CAGE cerebrum:2.44 cerebellum:- brain stem:2.73 corpus callosum/glia:2.26 pineal gland:3.07 peripheral nerve:- spine:3.24 retina:- eye:- artery/aorta:2.83 vein:2.49 lymphnode:2.04 peripheral blood:- spleen:2.64 thymus:2.46 bone marrow:- adipose:2.62 bone:- skin:-
RNA-seq cerebrum:1.45 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.41 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.94 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:21.90 prostate:- ovary:37.30 testis:30.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:33.90     liver/hepato:10.60        lung:24.40    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.96 placenta:4.21 prostate:5.32 ovary:5.36 testis:7.07 heart:5.18 muscle:4.18 esophagus:4.70 stomach:4.31 intestine:4.04 colon:3.46 liver/hepato:4.07 lung:4.93 bladder:- kidney:4.41 pituitary:5.27 thyroid/parathyroid:5.20 adrenal gland:5.76 pancreas:3.81 breast:4.70 salivary:4.88
CAGE uterus:2.72 placenta:1.89 prostate:2.78 ovary:2.87 testis:3.51 heart:2.95 muscle:1.83 esophagus:2.61 stomach:- intestine:1.84 colon:1.99     liver/hepato:1.79    lung:2.69 bladder:3.18 kidney:2.38 pituitary:3.41 thyroid/parathyroid:2.61 adrenal gland:- pancreas:1.87 breast:2.59 salivary:2.31
RNA-seq uterus:- placenta:- prostate:2.81 ovary:2.78 testis:4.14 heart:2.01 muscle:1.51 esophagus:- stomach:- intestine:- colon:2.57     liver/hepato:0.97        lung:2.76    bladder:- kidney:2.60 pituitary:- thyroid/parathyroid:2.49 adrenal gland:2.08 pancreas:- breast:2.24 salivary:-

Gene Information

IDs

Refseq ID NM_003082
Gene ID 6617
Unigene ID Hs.179312
Probe set ID 205443_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000023608
GTEx ID ENSG00000023608

Orthologous Gene

Mouse[1]  NM_178392
Rat[1]  NM_001108033

Chromosomal Region

14q23.2  [62,229,075  -  62,263,146]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7715707
8524284
9003788
9644240
11056176
11094070
12477932
12621023
15489334
15955816
20211142
21139048
21890473
22966203
23000965
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0006355  regulation of transcription, DNA-dependent
GO:0006383  transcription from RNA polymerase III promoter

Cellular Component

GO:0005654  nucleoplasm

Molecular Function

GO:0003677  DNA binding