TROVE domain family, member 2

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Synonym

SSA2, RO60, 60 kDa ribonucleoprotein Ro, SS-A, Ro 60 kDa autoantigen, Sjoegren syndrome type A antigen, 60 kDa SS-A/Ro ribonucleoprotein, Sjoegren syndrome antigen A2, 60 kDa Ro protein, TROVE domain family member 2, TROVE2, TROVE domain family, member 2, RoRNP

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:37.90 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:148.30 peripheral nerve:184 spine:- retina:118.60 eye:70.50 artery/aorta:149.90 vein:133.30 lymphnode:40.40 peripheral blood:54.70 spleen:94.50 thymus:25.80 bone marrow:236.20 adipose:40.30 bone:12.80 skin:139.20
GeneChip cerebrum:8.40 cerebellum:8.15 brain stem:8.53 corpus callosum/glia:9.18 pineal gland:- peripheral nerve:8.53 spine:8.99 retina:- eye:- artery/aorta:8.26 vein:8.47 lymphnode:8.25 peripheral blood:- spleen:8.56 thymus:8.80 bone marrow:8.01 adipose:8.31 bone:- skin:7.83
CAGE cerebrum:3.97 cerebellum:- brain stem:4.20 corpus callosum/glia:3.95 pineal gland:3.69 peripheral nerve:- spine:4.61 retina:- eye:- artery/aorta:4.04 vein:3.53 lymphnode:3.47 peripheral blood:- spleen:3.91 thymus:3.87 bone marrow:- adipose:4.15 bone:- skin:-
RNA-seq cerebrum:1.63 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.64 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.62 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:25.50 prostate:67.60 ovary:- testis:69.20 heart:25.50 muscle:60.30 esophagus:- stomach:- intestine:- colon:59.40     liver/hepato:73.90        lung:53.80    bladder:- kidney:93.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:62.20 breast:18.60 salivary:-
GeneChip uterus:8.84 placenta:8.07 prostate:8.95 ovary:9 testis:8.45 heart:8.22 muscle:7.85 esophagus:8.14 stomach:8.22 intestine:7.53 colon:7.27 liver/hepato:7.78 lung:8.68 bladder:- kidney:7.83 pituitary:7.94 thyroid/parathyroid:8.50 adrenal gland:8.39 pancreas:7.35 breast:8.56 salivary:7.24
CAGE uterus:4.20 placenta:3.87 prostate:4.23 ovary:4.32 testis:3.51 heart:4.01 muscle:3.62 esophagus:4.03 stomach:- intestine:3.81 colon:3.78     liver/hepato:3.68    lung:4.13 bladder:4.35 kidney:3.97 pituitary:3.92 thyroid/parathyroid:3.92 adrenal gland:- pancreas:3.16 breast:4.13 salivary:3.15
RNA-seq uterus:- placenta:- prostate:0.39 ovary:0.16 testis:2.19 heart:0.69 muscle:0.48 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.48        lung:0.41    bladder:- kidney:0.57 pituitary:- thyroid/parathyroid:0.20 adrenal gland:1.04 pancreas:- breast:0.18 salivary:-

Gene Information

IDs

Refseq ID NM_001042369
Gene ID 6738
Unigene ID Hs.288178
Probe set ID 210438_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000116747
GTEx ID ENSG00000116747

Orthologous Gene

Mouse[1]  NM_013835
Rat[1]  NM_001107183

Chromosomal Region

1q31.2  [193,028,552  -  193,060,907]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1689160
1833722
1999763
2649513
3200833
3926904
6201849
6421292
7602431
7829096
8188321
10545525
10785401
11251884
12096904
12102760
12477932
15489334
15928345
15964842
16344560
16710414
17289661
17353931
17552056
18029348
18056422
19248095
20089705
20131295
20224770
20237496
21060685
21139048
21145461
21890473
21906983
21963094
22114317
22863883
22939629
23000965
23349634
23644453
23698747

Gene Ontology  (GO ID)

Biological Process

GO:0060271  cilium morphogenesis
GO:0006383  transcription from RNA polymerase III promoter

Cellular Component

GO:0005737  cytoplasm
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0030529  ribonucleoprotein complex

Molecular Function

GO:0046872  metal ion binding
GO:0003723  RNA binding