single-stranded DNA binding protein 1

Synonym

single-stranded DNA binding protein 1, PWP1-interacting protein 17, MtSSB, single-stranded DNA-binding protein, Mt-SSB, SSBP, SSBP1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:43.90

cerebellum:63

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:122.70

spine:-

retina:-

eye:41.10

artery/aorta:89.90

vein:266.60

lymphnode:161.80

peripheral blood:127.50

spleen:-

thymus:25.80

bone marrow:78.70

adipose:80.70

bone:25.60

skin:67.20

GeneChip

cerebrum:7.56

cerebellum:7.25

brain stem:7.78

corpus callosum/glia:7.51

pineal gland:-

peripheral nerve:7.97

spine:7.70

retina:-

eye:-

artery/aorta:7.50

vein:7.98

lymphnode:7.89

peripheral blood:-

spleen:7.70

thymus:8.88

bone marrow:7.66

adipose:8.05

bone:-

skin:8.44

CAGE

cerebrum:4.41

cerebellum:-

brain stem:4.42

corpus callosum/glia:4.27

pineal gland:4.42

peripheral nerve:-

spine:4.60

retina:-

eye:-

artery/aorta:4.06

vein:4.29

lymphnode:4.61

peripheral blood:-

spleen:4.62

thymus:4.67

bone marrow:-

adipose:4.47

bone:-

skin:-

RNA-seq

cerebrum:5.38

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.52

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:6.00

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:72.90

placenta:25.50

prostate:112.60

ovary:260.80

testis:47.60

heart:191.60

muscle:40.20

esophagus:-

stomach:42.50

intestine:64.80

colon:42.40

liver/hepato:168.90

lung:39.10

bladder:-

kidney:62.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:142.30

breast:18.60

salivary:-

GeneChip

uterus:8.54

placenta:8.03

prostate:8.43

ovary:8.73

testis:8.82

heart:8.10

muscle:8.18

esophagus:8.52

stomach:7.78

intestine:8.10

colon:7.98

liver/hepato:7.24

lung:7.61

bladder:-

kidney:7.77

pituitary:7.29

thyroid/parathyroid:7.87

adrenal gland:7.74

pancreas:8.61

breast:8.16

salivary:7.87

CAGE

uterus:4.56

placenta:4.48

prostate:4.44

ovary:4.52

testis:4.55

heart:4.64

muscle:4.77

esophagus:4.61

stomach:-

intestine:4.38

colon:4.33

liver/hepato:4.94

lung:4.27

bladder:4.49

kidney:4.69

pituitary:4.60

thyroid/parathyroid:4.45

adrenal gland:-

pancreas:4.49

breast:4.07

salivary:4.55

RNA-seq

uterus:-

placenta:-

prostate:6.00

ovary:6.54

testis:7.03

heart:5.82

muscle:5.29

esophagus:-

stomach:-

intestine:-

colon:6.58

liver/hepato:6.21

lung:5.22

bladder:-

kidney:6.14

pituitary:-

thyroid/parathyroid:6.36

adrenal gland:6.48

pancreas:-

breast:6.17

salivary:-

IDs

Refseq ID	NM_003143
Gene ID	6742
Unigene ID	Hs.490394
Probe set ID	202591_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000106028
GTEx ID	ENSG00000106028

Orthologous Gene

Mouse[8]	NM_028358, NM_212468
Rat [0]

Chromosomal Region

7q34 [141,438,121 - 141,487,722]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000424	Primosome PriB/single-strand DNA-binding
IPR011344	Single-strand DNA-binding

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0006260	DNA replication
GO:0070584	mitochondrion morphogenesis
GO:0051096	positive regulation of helicase activity

Cellular Component

GO:0042645	mitochondrial nucleoid
GO:0005739	mitochondrion

Molecular Function

GO:0003682	chromatin binding
GO:0005515	protein binding
GO:0003697	single-stranded DNA binding

single-stranded DNA binding protein 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function