synovial sarcoma, X breakpoint 4 |
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Synonym
synovial sarcoma, X breakpoint 4, MGC12411, Protein SSX4, SSX4
Choropleth map on BodyParts3D
Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.
Classification in 40 Organs
 brain
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blood
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connective
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| EST | cerebrum:- | cerebellum:- | brain stem:- | corpus callosum/glia:- | pineal gland:- | peripheral nerve:- | spine:- | retina:- | eye:11.80 | artery/aorta:- | vein:- | lymphnode:10.10 | peripheral blood:- | spleen:- | thymus:- | bone marrow:- | adipose:- | bone:- | skin:28.80 | ||||||||||||||||||||||
| GeneChip | cerebrum:2.92 | cerebellum:2.82 | brain stem:2.96 | corpus callosum/glia:2.90 | pineal gland:- | peripheral nerve:2.81 | spine:2.77 | retina:- | eye:- | artery/aorta:2.86 | vein:3.10 | lymphnode:2.83 | peripheral blood:- | spleen:2.78 | thymus:2.73 | bone marrow:2.90 | adipose:2.89 | bone:- | skin:2.87 | ||||||||||||||||||||||
| CAGE | nodata | ||||||||||||||||||||||||||||||||||||||||
| RNA-seq | cerebrum:0 | cerebellum:- | brain stem:- | corpus callosum/glia:- | pineal gland:- | peripheral nerve:- | spine:- | retina:- | eye:- | artery/aorta:- | vein:- | lymphnode:0 | peripheral blood:- | spleen:- | thymus:- | bone marrow:- | adipose:0.00 | bone:- | skin:- | ||||||||||||||||||||||
reproductive
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muscular
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alimentary
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liver
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lung
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urinary
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endo/exo-crine
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| EST | uterus:- | placenta:- | prostate:- | ovary:- | testis:- | heart:- | muscle:- | esophagus:- | stomach:- | intestine:- | colon:- | liver/hepato:- | lung:- | bladder:- | kidney:- | pituitary:- | thyroid/parathyroid:- | adrenal gland:- | pancreas:- | breast:- | salivary:- | ||||||||||||||||||||||||||||||||
| GeneChip | uterus:2.79 | placenta:2.96 | prostate:2.75 | ovary:2.80 | testis:2.95 | heart:2.98 | muscle:3.02 | esophagus:2.94 | stomach:2.80 | intestine:2.87 | colon:2.85 | liver/hepato:2.85 | lung:2.78 | bladder:- | kidney:2.95 | pituitary:2.81 | thyroid/parathyroid:2.80 | adrenal gland:2.83 | pancreas:2.86 | breast:2.73 | salivary:2.76 | ||||||||||||||||||||||||||||||||
| CAGE | nodata | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| RNA-seq | uterus:- | placenta:- | prostate:0.03 | ovary:0 | testis:0.87 | heart:0 | muscle:0 | esophagus:- | stomach:- | intestine:- | colon:0 | liver/hepato:0 | lung:0 | bladder:- | kidney:0 | pituitary:- | thyroid/parathyroid:0.11 | adrenal gland:0 | pancreas:- | breast:0.05 | salivary:- | ||||||||||||||||||||||||||||||||
IDs
| Refseq ID | NM_175729 |
|---|---|
| Gene ID | 6759 |
| Unigene ID | Hs.558402 |
| Probe set ID | 208586_s_at [HG-U133_Plus_2] |
| Ensembl ID | ENSG00000198946
ENSG00000204645 |
| GTEx ID | ENSG00000198946
ENSG00000204645 |
Orthologous Gene
| Mouse[11] | NM_001001450, NM_001134226, NM_199063, NM_199066, NM_199064, NM_199319, NM_001081564, NM_198898, NM_001205108, NM_001081565, NM_001126491, NM_026492 |
| Rat[11] | NM_001001450, NM_001134226, NM_199063, NM_199066, NM_199064, NM_199319, NM_001081564, NM_198898, NM_001205108, NM_001081565, NM_001126491, NM_026492 |
Chromosomal Region
Gene Family (Interpro ID)
Link to Pubmed (Pubmed ID)
Gene Ontology (GO ID)
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