TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

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Synonym

TAF5, TAFII-100, TAF(II)100, Transcription initiation factor TFIID subunit 5, TAF2D, TAFII100

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:5.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:40.40

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:4.96

cerebellum:5.53

brain stem:4.98

corpus callosum/glia:5.02

pineal gland:-

peripheral nerve:5.08

spine:4.82

retina:-

eye:-

artery/aorta:5.20

vein:5.10

lymphnode:5.44

peripheral blood:-

spleen:5.51

thymus:6.27

bone marrow:6.12

adipose:4.99

bone:-

skin:5.41

CAGE

cerebrum:1.92

cerebellum:-

brain stem:1.76

corpus callosum/glia:1.73

pineal gland:1.82

peripheral nerve:-

spine:1.86

retina:-

eye:-

artery/aorta:1.16

vein:1.83

lymphnode:1.75

peripheral blood:-

spleen:1.65

thymus:2.58

bone marrow:-

adipose:1.99

bone:-

skin:-

RNA-seq

cerebrum:0.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.98

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.28

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:11.30

ovary:-

testis:34.60

heart:-

muscle:-

esophagus:-

stomach:-

intestine:32.40

colon:-

liver/hepato:10.60

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:5.44

placenta:5.62

prostate:5.08

ovary:5.22

testis:7.11

heart:4.92

muscle:5.13

esophagus:4.93

stomach:5.15

intestine:4.95

colon:4.93

liver/hepato:4.91

lung:5.31

bladder:-

kidney:4.73

pituitary:5.20

thyroid/parathyroid:5.29

adrenal gland:4.79

pancreas:4.46

breast:5.19

salivary:4.76

CAGE

uterus:1.79

placenta:1.68

prostate:1.74

ovary:1.44

testis:3.18

heart:1.53

muscle:1.46

esophagus:1.41

stomach:-

intestine:1.76

colon:2.10

liver/hepato:1.74

lung:1.65

bladder:1.66

kidney:1.30

pituitary:1.97

thyroid/parathyroid:1.68

adrenal gland:-

pancreas:2.08

breast:2.11

salivary:1.15

RNA-seq

uterus:-

placenta:-

prostate:1.78

ovary:1.48

testis:3.86

heart:0.98

muscle:1.31

esophagus:-

stomach:-

intestine:-

colon:1.90

liver/hepato:1.15

lung:1.18

bladder:-

kidney:1.36

pituitary:-

thyroid/parathyroid:1.28

adrenal gland:0.99

pancreas:-

breast:1.15

salivary:-

IDs

Refseq ID	NM_006951
Gene ID	6877
Unigene ID	Hs.96103
Probe set ID	210053_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000148835
GTEx ID	ENSG00000148835

Orthologous Gene

Mouse[1]	NM_177342
Rat[1]	NM_001106365

Chromosomal Region

10q24.33 [105,127,724 - 105,148,822]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR020472	G-protein beta WD-40 repeat, region
IPR006594	LisH dimerisation motif
IPR001680	WD40 repeat
IPR019782	WD40 repeat 2
IPR019781	WD40 repeat, subgroup
IPR011046	WD40 repeat-like-containing domain
IPR017986	WD40-repeat-containing domain
IPR015943	WD40/YVTN repeat-like-containing domain

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0016568	chromatin modification
GO:0010467	gene expression
GO:0016573	histone acetylation
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0006366	transcription from RNA polymerase II promoter
GO:0006352	transcription initiation
GO:0006367	transcription initiation from RNA polymerase II promoter
GO:0016032	viral reproduction
GO:0019048	virus-host interaction

Cellular Component

GO:0015629	actin cytoskeleton
GO:0043231	intracellular membrane-bounded organelle
GO:0005730	nucleolus
GO:0005654	nucleoplasm
GO:0005634	nucleus
GO:0005669	transcription factor TFIID complex
GO:0033276	transcription factor TFTC complex

Molecular Function

GO:0044212	DNA regulatory region binding
GO:0004402	histone acetyltransferase activity
GO:0005515	protein binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function