TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa

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Synonym

Transcription initiation factor TFIID subunit 7, TAFII-55, TAFII55, TAF2F, TAF7, TAF(II)55

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:208.60 cerebellum:277.10 brain stem:- corpus callosum/glia:291.60 pineal gland:- peripheral nerve:153.40 spine:224.60 retina:- eye:58.80 artery/aorta:269.80 vein:- lymphnode:91 peripheral blood:236.80 spleen:661.70 thymus:373.60 bone marrow:98.40 adipose:201.70 bone:102.40 skin:182.40
GeneChip cerebrum:7.96 cerebellum:8.40 brain stem:8.02 corpus callosum/glia:8.20 pineal gland:- peripheral nerve:8.61 spine:8.31 retina:- eye:- artery/aorta:7.98 vein:8.21 lymphnode:8.42 peripheral blood:- spleen:8.71 thymus:9.32 bone marrow:7.96 adipose:8.11 bone:- skin:7.96
CAGE cerebrum:4.04 cerebellum:- brain stem:4.13 corpus callosum/glia:3.97 pineal gland:4.55 peripheral nerve:- spine:4.10 retina:- eye:- artery/aorta:4.03 vein:4.33 lymphnode:3.97 peripheral blood:- spleen:4.03 thymus:4.69 bone marrow:- adipose:4.21 bone:- skin:-
RNA-seq cerebrum:5.78 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:6.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.41 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:182.30 placenta:94.70 prostate:157.70 ovary:- testis:233.60 heart:217.10 muscle:140.60 esophagus:342.80 stomach:127.50 intestine:291.60 colon:50.90     liver/hepato:147.80        lung:190.60    bladder:502.40 kidney:114.40 pituitary:232 thyroid/parathyroid:- adrenal gland:203.10 pancreas:80 breast:83.60 salivary:-
GeneChip uterus:8.57 placenta:8.81 prostate:8.71 ovary:8.94 testis:8.86 heart:8.57 muscle:8.84 esophagus:7.97 stomach:7.96 intestine:7.89 colon:7.38 liver/hepato:7.59 lung:8.25 bladder:- kidney:7.87 pituitary:8.64 thyroid/parathyroid:8.40 adrenal gland:8.17 pancreas:7.74 breast:8.29 salivary:7.93
CAGE uterus:4.15 placenta:4.27 prostate:4.31 ovary:4.54 testis:4.27 heart:4.37 muscle:4.64 esophagus:3.91 stomach:- intestine:4.03 colon:3.63     liver/hepato:3.66    lung:3.92 bladder:4.15 kidney:3.96 pituitary:4.69 thyroid/parathyroid:4.42 adrenal gland:- pancreas:3.80 breast:4.35 salivary:3.60
RNA-seq uterus:- placenta:- prostate:5.88 ovary:6.59 testis:6.39 heart:5.47 muscle:6.15 esophagus:- stomach:- intestine:- colon:5.97     liver/hepato:3.90        lung:5.99    bladder:- kidney:5.54 pituitary:- thyroid/parathyroid:6.33 adrenal gland:5.23 pancreas:- breast:5.40 salivary:-

Gene Information

IDs

Refseq ID NM_005642
Gene ID 6879
Unigene ID Hs.438838
Probe set ID 201023_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000178913
GTEx ID ENSG00000178913

Orthologous Gene

Mouse[2]  NM_175770
Rat [0]  

Chromosomal Region

5q31.3  [140,698,057  -  140,700,330]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7824954
7835343
7836461
7933101
8012384
8121496
8680883
8702684
8764009
8764062
8794892
8849451
9045704
9054383
9153318
9311784
9488465
9603525
9632676
10409738
10896937
11005381
11230163
11340078
11438666
11564863
11592977
12477932
12665565
12676957
14580349
15078871
15099517
15489334
15893730
15899866
15960975
16407123
16415881
17081983
17320040
17643375
17884155
18029348
18391197
19240132
20211142
20937824
21139048
21729782
21890473
21900206
21988832
22323595
22424883
22711989
22939629
23000965
23027873
24250222
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0030520  estrogen receptor signaling pathway
GO:0035067  negative regulation of histone acetylation
GO:0006469  negative regulation of protein kinase activity
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0000296  spermine transport
GO:0006366  transcription from RNA polymerase II promoter
GO:0006352  transcription initiation
GO:0006367  transcription initiation from RNA polymerase II promoter

Cellular Component

GO:0005794  Golgi apparatus
GO:0071339  MLL1 complex
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0008024  positive transcription elongation factor complex b
GO:0005669  transcription factor TFIID complex
GO:0033276  transcription factor TFTC complex

Molecular Function

GO:0044212  DNA regulatory region binding
GO:0035035  histone acetyltransferase binding
GO:0005515  protein binding
GO:0046966  thyroid hormone receptor binding
GO:0003713  transcription coactivator activity
GO:0003700  transcription factor activity
GO:0008134  transcription factor binding
GO:0042809  vitamin D receptor binding