TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa

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Synonym

TAFII30, TAFII-30, TAF(II)30, STAF28, TAF2H, Transcription initiation factor TFIID subunit 10, TAF2A, TAF10

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.35 cerebellum:6.82 brain stem:8.65 corpus callosum/glia:8.62 pineal gland:- peripheral nerve:8.08 spine:8.57 retina:- eye:- artery/aorta:7.80 vein:7.64 lymphnode:8.70 peripheral blood:- spleen:9.06 thymus:7.89 bone marrow:8.97 adipose:7.89 bone:- skin:7.82
CAGE cerebrum:4.34 cerebellum:- brain stem:4.38 corpus callosum/glia:4.82 pineal gland:4.25 peripheral nerve:- spine:4.36 retina:- eye:- artery/aorta:4.30 vein:4.97 lymphnode:5.12 peripheral blood:- spleen:5.27 thymus:5.33 bone marrow:- adipose:4.68 bone:- skin:-
RNA-seq cerebrum:4.54 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.32 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.03 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.95 placenta:8.54 prostate:7.92 ovary:7.81 testis:6.98 heart:7.95 muscle:7.11 esophagus:7.32 stomach:7.79 intestine:7.70 colon:7.86 liver/hepato:8.14 lung:8.56 bladder:- kidney:8.57 pituitary:8.43 thyroid/parathyroid:7.83 adrenal gland:8.94 pancreas:6.91 breast:7.78 salivary:6.93
CAGE uterus:4.42 placenta:4.85 prostate:4.61 ovary:4.74 testis:5.51 heart:4.80 muscle:4.96 esophagus:5.00 stomach:- intestine:4.88 colon:4.78     liver/hepato:5.45    lung:4.91 bladder:4.59 kidney:5.03 pituitary:4.21 thyroid/parathyroid:5.06 adrenal gland:- pancreas:5.27 breast:4.65 salivary:5.09
RNA-seq uterus:- placenta:- prostate:5.36 ovary:4.80 testis:5.89 heart:4.45 muscle:5.38 esophagus:- stomach:- intestine:- colon:4.57     liver/hepato:5.72        lung:6.12    bladder:- kidney:5.05 pituitary:- thyroid/parathyroid:5.24 adrenal gland:5.67 pancreas:- breast:5.24 salivary:-

Gene Information

IDs

Refseq ID NM_006284
Gene ID 6881
Unigene ID -
Probe set ID 200743_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166337
GTEx ID ENSG00000166337

Orthologous Gene

Mouse[2]  NM_020024
Rat[1]  NM_001134735

Chromosomal Region

11p15.4  [6,627,526  -  6,633,898]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1939271
2449431
7680771
7729427
7744009
7835343
7836461
7923369
7933101
8121496
8530084
8598193
8680883
8764009
8764062
8849451
8946909
9054383
9153318
9154123
9212049
9405375
9603525
9674425
9885574
10373431
10469660
11406595
11438666
11564863
12477932
12601814
12660246
12762840
14499622
14580349
15099517
15115762
15489334
15870280
16169070
16415881
17375202
17599049
17643375
17709345
17884155
17967894
18029348
18206972
18250150
19240132
20106982
20457598
21729782
22323595
22834489
22939629
23827503

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0016578  histone deubiquitination
GO:0043966  histone H3 acetylation
GO:0051260  protein homooligomerization
GO:0006368  RNA elongation from RNA polymerase II promoter
GO:0006366  transcription from RNA polymerase II promoter
GO:0006352  transcription initiation
GO:0006367  transcription initiation from RNA polymerase II promoter
GO:0016032  viral reproduction

Cellular Component

GO:0005737  cytoplasm
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0000125  PCAF complex
GO:0048471  perinuclear region of cytoplasm
GO:0030914  STAGA complex
GO:0005669  transcription factor TFIID complex
GO:0033276  transcription factor TFTC complex

Molecular Function

GO:0019899  enzyme binding
GO:0030331  estrogen receptor binding
GO:0004402  histone acetyltransferase activity
GO:0005515  protein binding
GO:0070063  RNA polymerase binding
GO:0003713  transcription coactivator activity
GO:0003700  transcription factor activity