transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)

jump to detail

Synonym

SIII p18, Transcription elongation factor B polypeptide 2, Elongin 18 kDa subunit, TCEB2, Elongin B, EloB

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:48.60

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:92

spine:-

retina:118.60

eye:88.20

artery/aorta:30

vein:199.90

lymphnode:60.70

peripheral blood:164

spleen:-

thymus:-

bone marrow:19.70

adipose:121

bone:12.80

skin:81.60

GeneChip

cerebrum:9.21

cerebellum:8.77

brain stem:9.37

corpus callosum/glia:8.91

pineal gland:-

peripheral nerve:9.26

spine:8.99

retina:-

eye:-

artery/aorta:9.13

vein:8.98

lymphnode:8.87

peripheral blood:-

spleen:8.49

thymus:9.37

bone marrow:8.74

adipose:8.90

bone:-

skin:9.41

CAGE

cerebrum:3.92

cerebellum:-

brain stem:3.76

corpus callosum/glia:3.66

pineal gland:3.66

peripheral nerve:-

spine:3.61

retina:-

eye:-

artery/aorta:4.22

vein:3.79

lymphnode:3.88

peripheral blood:-

spleen:3.58

thymus:3.85

bone marrow:-

adipose:3.65

bone:-

skin:-

RNA-seq

cerebrum:4.10

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.67

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.65

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:36.50

placenta:51

prostate:123.90

ovary:74.50

testis:73.50

heart:153.30

muscle:884

esophagus:-

stomach:-

intestine:-

colon:50.90

liver/hepato:285

lung:44

bladder:-

kidney:10.40

pituitary:232

thyroid/parathyroid:163.70

adrenal gland:-

pancreas:-

breast:37.20

salivary:-

GeneChip

uterus:9.16

placenta:8.65

prostate:9.39

ovary:9.43

testis:10.85

heart:8.99

muscle:8.78

esophagus:9.26

stomach:8.53

intestine:8.85

colon:8.78

liver/hepato:8.59

lung:9.08

bladder:-

kidney:9.08

pituitary:9.35

thyroid/parathyroid:9.08

adrenal gland:9.03

pancreas:8.68

breast:9.17

salivary:9.61

CAGE

uterus:3.72

placenta:3.93

prostate:3.87

ovary:3.68

testis:4.55

heart:4.33

muscle:4.47

esophagus:4.17

stomach:-

intestine:3.74

colon:4.34

liver/hepato:4.33

lung:3.90

bladder:3.77

kidney:4.06

pituitary:3.59

thyroid/parathyroid:4.17

adrenal gland:-

pancreas:4.10

breast:3.90

salivary:4.63

RNA-seq

uterus:-

placenta:-

prostate:4.57

ovary:4.78

testis:6.07

heart:3.30

muscle:4.19

esophagus:-

stomach:-

intestine:-

colon:4.83

liver/hepato:3.65

lung:4.44

bladder:-

kidney:5.09

pituitary:-

thyroid/parathyroid:4.32

adrenal gland:5.03

pancreas:-

breast:4.65

salivary:-

IDs

Refseq ID	NM_007108
Gene ID	6923
Unigene ID	Hs.172772
Probe set ID	200085_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000103363
GTEx ID	ENSG00000103363

Orthologous Gene

Mouse[2]	NM_026305
Rat[1]	NM_031129

Chromosomal Region

16p13.3 [2,821,415 - 2,827,278]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000626	Ubiquitin
IPR019955	Ubiquitin supergroup

GO:0071456	cellular response to hypoxia
GO:0010467	gene expression
GO:0050434	positive regulation of viral transcription
GO:0006461	protein complex assembly
GO:0016567	protein ubiquitination
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0006366	transcription from RNA polymerase II promoter
GO:0016032	viral reproduction

GO:0031462	Cul2-RING ubiquitin ligase complex
GO:0031466	Cul5-RING ubiquitin ligase complex
GO:0005829	cytosol
GO:0005654	nucleoplasm

GO:0005515	protein binding
GO:0031625	ubiquitin protein ligase binding

transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function