transcription factor 4

Synonym

SEF2-1B, SEF2, ITF2, transcription factor 4, SEF-2, Transcription factor 4, SL3-3 enhancer factor 2, SEF2-1, SEF2-1A, TCF4, E2-2, ITF-2, Immunoglobulin transcription factor 2

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:10.10

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:9.09

cerebellum:10.01

brain stem:8.74

corpus callosum/glia:9.39

pineal gland:-

peripheral nerve:9.12

spine:9.02

retina:-

eye:-

artery/aorta:9.29

vein:9.31

lymphnode:9.47

peripheral blood:-

spleen:9.46

thymus:8.46

bone marrow:7.20

adipose:9.63

bone:-

skin:8.88

CAGE

cerebrum:4.79

cerebellum:-

brain stem:4.66

corpus callosum/glia:4.54

pineal gland:4.31

peripheral nerve:-

spine:4.66

retina:-

eye:-

artery/aorta:4.66

vein:4.43

lymphnode:4.04

peripheral blood:-

spleen:4.51

thymus:3.65

bone marrow:-

adipose:5.39

bone:-

skin:-

RNA-seq

cerebrum:0.09

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.03

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.43

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:12.80

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:10

placenta:8.14

prostate:8.51

ovary:9.39

testis:7.36

heart:9.30

muscle:7.95

esophagus:8.14

stomach:8.72

intestine:8.18

colon:8.01

liver/hepato:6.97

lung:9.51

bladder:-

kidney:6.60

pituitary:8.83

thyroid/parathyroid:9.08

adrenal gland:9.50

pancreas:6.52

breast:9.56

salivary:8.05

CAGE

uterus:5.07

placenta:4.13

prostate:4.25

ovary:4.64

testis:3.94

heart:4.59

muscle:4.28

esophagus:4.07

stomach:-

intestine:3.41

colon:3.88

liver/hepato:2.91

lung:4.86

bladder:4.64

kidney:3.12

pituitary:4.42

thyroid/parathyroid:4.12

adrenal gland:-

pancreas:2.71

breast:4.51

salivary:3.83

RNA-seq

uterus:-

placenta:-

prostate:0.39

ovary:0.35

testis:0.07

heart:0.04

muscle:0.11

esophagus:-

stomach:-

intestine:-

colon:0.51

liver/hepato:0.00

lung:0.53

bladder:-

kidney:0.05

pituitary:-

thyroid/parathyroid:0.10

adrenal gland:0.05

pancreas:-

breast:0.15

salivary:-

IDs

Refseq ID	NM_001083962
Gene ID	6925
Unigene ID	Hs.605153
Probe set ID	212386_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000196628
GTEx ID	ENSG00000196628

Orthologous Gene

Mouse[10]	NM_001083967, NM_013685
Rat [0]

Chromosomal Region

18q21.2 [52,889,562 - 53,303,185]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

GO:0045666	positive regulation of neuron differentiation
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0065004	protein-DNA complex assembly
GO:0006352	transcription initiation
GO:0006367	transcription initiation from RNA polymerase II promoter

GO:0005634	nucleus
GO:0005667	transcription factor complex

GO:0003677	DNA binding
GO:0070888	E-box binding
GO:0005515	protein binding
GO:0008022	protein C-terminus binding
GO:0046982	protein heterodimerization activity
GO:0003700	transcription factor activity

transcription factor 4

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function