Thy-1 cell surface antigen

Synonym

Thy-1 membrane glycoprotein precursor, THY1, Thy-1 antigen, CD90 antigen, CD90, CDw90 antigen, Thy-1 cell surface antigen, FLJ33325

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:9.23

cerebellum:8.13

brain stem:8.97

corpus callosum/glia:7.20

pineal gland:-

peripheral nerve:10.09

spine:7.89

retina:-

eye:-

artery/aorta:7.04

vein:7.79

lymphnode:7.44

peripheral blood:-

spleen:6.67

thymus:6.80

bone marrow:6.09

adipose:7.70

bone:-

skin:7.17

CAGE

cerebrum:6.18

cerebellum:-

brain stem:4.78

corpus callosum/glia:4.70

pineal gland:5.14

peripheral nerve:-

spine:4.36

retina:-

eye:-

artery/aorta:4.24

vein:4.49

lymphnode:4.12

peripheral blood:-

spleen:4.02

thymus:3.78

bone marrow:-

adipose:3.75

bone:-

skin:-

RNA-seq

cerebrum:6.33

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.74

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.50

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:8.29

placenta:7.02

prostate:6.55

ovary:7.44

testis:6.34

heart:6.83

muscle:6.71

esophagus:6.82

stomach:7.01

intestine:7.36

colon:7.27

liver/hepato:6.44

lung:6.75

bladder:-

kidney:8.78

pituitary:6.63

thyroid/parathyroid:7.55

adrenal gland:6.80

pancreas:6.94

breast:7.52

salivary:6.55

CAGE

uterus:5.10

placenta:5.18

prostate:3.64

ovary:3.87

testis:3.82

heart:2.65

muscle:1.73

esophagus:3.87

stomach:-

intestine:3.67

colon:4.09

liver/hepato:1.79

lung:3.07

bladder:4.46

kidney:4.71

pituitary:3.58

thyroid/parathyroid:3.17

adrenal gland:-

pancreas:2.66

breast:3.84

salivary:2.43

RNA-seq

uterus:-

placenta:-

prostate:3.76

ovary:3.87

testis:5.13

heart:0.88

muscle:0.31

esophagus:-

stomach:-

intestine:-

colon:3.79

liver/hepato:1.45

lung:3.16

bladder:-

kidney:5.29

pituitary:-

thyroid/parathyroid:3.73

adrenal gland:5.68

pancreas:-

breast:5.30

salivary:-

IDs

Refseq ID	NM_006288
Gene ID	7070
Unigene ID	Hs.644697
Probe set ID	208851_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000154096
GTEx ID	ENSG00000154096

Orthologous Gene

Mouse[1]	NM_009382
Rat[1]	NM_012673

Chromosomal Region

11q23.3 [119,288,090 - 119,295,695]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR013106	Immunoglobulin V-set
IPR003596	Immunoglobulin V-set, subgroup

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0001525	angiogenesis
GO:0016337	cell-cell adhesion
GO:0007010	cytoskeleton organization
GO:0048041	focal adhesion formation
GO:0050771	negative regulation of axonogenesis
GO:0030336	negative regulation of cell migration
GO:0006469	negative regulation of protein kinase activity
GO:0050860	negative regulation of T cell receptor signaling pathway
GO:0043547	positive regulation of GTPase activity
GO:0051281	positive regulation of release of sequestered calcium ion into cytosol
GO:0050870	positive regulation of T cell activation
GO:0046549	retinal cone cell development
GO:0050852	T cell receptor signaling pathway

Cellular Component

GO:0031362	anchored to external side of plasma membrane
GO:0016324	apical plasma membrane
GO:0005829	cytosol
GO:0030425	dendrite
GO:0005783	endoplasmic reticulum
GO:0009897	external side of plasma membrane
GO:0030426	growth cone
GO:0005887	integral to plasma membrane
GO:0045121	membrane raft
GO:0005886	plasma membrane

Molecular Function

GO:0034235	GPI anchor binding
GO:0005178	integrin binding
GO:0005515	protein binding
GO:0019901	protein kinase binding
GO:0005100	Rho GTPase activator activity

Thy-1 cell surface antigen

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function