cold shock domain containing E1, RNA-binding

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Synonym

DKFZp779B0247, D1S155E, KIAA0885, DKFZp779J1455, FLJ26882, CSDE1, N-ras upstream gene protein, cold shock domain containing E1, RNA-binding, Cold shock domain-containing protein E1, NRU, UNR protein, RP5-1000E10.3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:762.10 cerebellum:541.50 brain stem:- corpus callosum/glia:1195.60 pineal gland:- peripheral nerve:214.70 spine:1459.90 retina:593.20 eye:246.80 artery/aorta:989.20 vein:199.90 lymphnode:252.80 peripheral blood:400.80 spleen:472.70 thymus:1339.90 bone marrow:354.20 adipose:524.30 bone:627 skin:456
GeneChip cerebrum:9 cerebellum:8.71 brain stem:9.33 corpus callosum/glia:9.09 pineal gland:- peripheral nerve:9.62 spine:9.15 retina:- eye:- artery/aorta:9.51 vein:9.74 lymphnode:9.09 peripheral blood:- spleen:9.13 thymus:9.18 bone marrow:8.40 adipose:9.84 bone:- skin:9.30
CAGE cerebrum:5.68 cerebellum:- brain stem:5.96 corpus callosum/glia:5.68 pineal gland:5.86 peripheral nerve:- spine:5.98 retina:- eye:- artery/aorta:6.05 vein:5.73 lymphnode:5.63 peripheral blood:- spleen:5.73 thymus:5.76 bone marrow:- adipose:6.55 bone:- skin:-
RNA-seq cerebrum:3.05 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.83 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.81 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:628.80 placenta:360.70 prostate:202.80 ovary:372.60 testis:1168.10 heart:408.70 muscle:1446.50 esophagus:- stomach:828.40 intestine:615.60 colon:305.30     liver/hepato:285        lung:958    bladder:502.40 kidney:322.30 pituitary:811.90 thyroid/parathyroid:491.20 adrenal gland:457.10 pancreas:320.10 breast:511.10 salivary:328.40
GeneChip uterus:9.60 placenta:8.61 prostate:9.62 ovary:9.68 testis:9.53 heart:9.77 muscle:10.78 esophagus:9.50 stomach:9.46 intestine:9.24 colon:8.46 liver/hepato:9.03 lung:9.13 bladder:- kidney:9.02 pituitary:9.09 thyroid/parathyroid:9.61 adrenal gland:9.46 pancreas:8.82 breast:9.76 salivary:9.36
CAGE uterus:6.10 placenta:5.84 prostate:6.28 ovary:6.03 testis:6.18 heart:6.19 muscle:6.87 esophagus:6.33 stomach:- intestine:6.06 colon:5.51     liver/hepato:5.77    lung:5.83 bladder:6.58 kidney:5.75 pituitary:5.89 thyroid/parathyroid:6.20 adrenal gland:- pancreas:5.77 breast:6.03 salivary:5.86
RNA-seq uterus:- placenta:- prostate:4.39 ovary:3.35 testis:4.53 heart:1.98 muscle:1.69 esophagus:- stomach:- intestine:- colon:4.15     liver/hepato:1.74        lung:2.95    bladder:- kidney:1.52 pituitary:- thyroid/parathyroid:4.51 adrenal gland:2.79 pancreas:- breast:3.60 salivary:-

Gene Information

IDs

Refseq ID NM_001007553
Gene ID 7812
Unigene ID Hs.69855
Probe set ID 219939_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000009307
GTEx ID ENSG00000009307

Orthologous Gene

Mouse[4]  NM_001161854, NM_144901
Rat [0]  

Chromosomal Region

1p13.2  [115,259,534  -  115,301,297]

Gene Family (Interpro ID)

IPR011129  Cold shock protein

Link to Pubmed  (Pubmed ID)

2052355
2204029
8439573
8619474
8889548
9110174
10048485
10049359
11051545
11076863
12477932
12667457
14702039
15314026
15342556
15489334
15489336
15928332
16169070
16344560
16356927
16381901
16710414
16751776
17081983
17159903
17474147
17947529
18781797
19322201
19913121
20360068
20379614
20628086
20936779
20972266
21048031
21139048
21145461
21890473
21906983
21963094
22053931
22190034
22505724
22586326
22863883
23000965
24189344
24250222
24550385
24583282
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008584  male gonad development
GO:0070966  nuclear-transcribed mRNA catabolic process, no-go decay
GO:0006355  regulation of transcription, DNA-dependent

Cellular Component

GO:0070937  CRD-mediated mRNA stability complex

Molecular Function

GO:0003677  DNA binding
GO:0003723  RNA binding