cold shock domain containing E1, RNA-binding

Synonym

DKFZp779B0247, D1S155E, KIAA0885, DKFZp779J1455, FLJ26882, CSDE1, N-ras upstream gene protein, cold shock domain containing E1, RNA-binding, Cold shock domain-containing protein E1, NRU, UNR protein, RP5-1000E10.3

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:762.10

cerebellum:541.50

brain stem:-

corpus callosum/glia:1195.60

pineal gland:-

peripheral nerve:214.70

spine:1459.90

retina:593.20

eye:246.80

artery/aorta:989.20

vein:199.90

lymphnode:252.80

peripheral blood:400.80

spleen:472.70

thymus:1339.90

bone marrow:354.20

adipose:524.30

bone:627

skin:456

GeneChip

cerebrum:8.95

cerebellum:9.16

brain stem:9.10

corpus callosum/glia:9.09

pineal gland:-

peripheral nerve:9.45

spine:9.06

retina:-

eye:-

artery/aorta:9.58

vein:9.79

lymphnode:8.76

peripheral blood:-

spleen:8.53

thymus:8.54

bone marrow:8.11

adipose:9.40

bone:-

skin:9.37

CAGE

cerebrum:5.68

cerebellum:-

brain stem:5.96

corpus callosum/glia:5.68

pineal gland:5.86

peripheral nerve:-

spine:5.98

retina:-

eye:-

artery/aorta:6.05

vein:5.73

lymphnode:5.63

peripheral blood:-

spleen:5.73

thymus:5.76

bone marrow:-

adipose:6.55

bone:-

skin:-

RNA-seq

cerebrum:5.80

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:6.53

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:7.24

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:628.80

placenta:360.70

prostate:202.80

ovary:372.60

testis:1168.10

heart:408.70

muscle:1446.50

esophagus:-

stomach:828.40

intestine:615.60

colon:305.30

liver/hepato:285

lung:958

bladder:502.40

kidney:322.30

pituitary:811.90

thyroid/parathyroid:491.20

adrenal gland:457.10

pancreas:320.10

breast:511.10

salivary:328.40

GeneChip

uterus:9.18

placenta:8.54

prostate:9.34

ovary:9.29

testis:9.57

heart:9.47

muscle:10.78

esophagus:9.18

stomach:8.99

intestine:9.13

colon:8.23

liver/hepato:8.32

lung:9.03

bladder:-

kidney:8.68

pituitary:9.05

thyroid/parathyroid:9.47

adrenal gland:8.88

pancreas:8.85

breast:9.55

salivary:8.84

CAGE

uterus:6.10

placenta:5.84

prostate:6.28

ovary:6.03

testis:6.18

heart:6.19

muscle:6.87

esophagus:6.33

stomach:-

intestine:6.06

colon:5.51

liver/hepato:5.77

lung:5.83

bladder:6.58

kidney:5.75

pituitary:5.89

thyroid/parathyroid:6.20

adrenal gland:-

pancreas:5.77

breast:6.03

salivary:5.86

RNA-seq

uterus:-

placenta:-

prostate:7.24

ovary:7.02

testis:6.98

heart:4.92

muscle:4.70

esophagus:-

stomach:-

intestine:-

colon:7.29

liver/hepato:4.91

lung:6.71

bladder:-

kidney:5.82

pituitary:-

thyroid/parathyroid:7.10

adrenal gland:6.20

pancreas:-

breast:7.50

salivary:-

IDs

Refseq ID	NM_007158
Gene ID	7812
Unigene ID	Hs.69855
Probe set ID	202646_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000009307
GTEx ID	ENSG00000009307

Orthologous Gene

Mouse[4]	NM_001161854, NM_144901
Rat [0]

Chromosomal Region

1p13.2 [115,259,534 - 115,301,297]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR011129

Cold shock protein

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0008584	male gonad development
GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay
GO:0006355	regulation of transcription, DNA-dependent

Cellular Component

GO:0070937

CRD-mediated mRNA stability complex

Molecular Function

GO:0003677	DNA binding
GO:0003723	RNA binding

cold shock domain containing E1, RNA-binding

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function