HLA-B associated transcript 3

Synonym

HLA-B-associated transcript 3, BAT3, Protein G3, G3, Large proline-rich protein BAT3, HLA-B associated transcript 3, D6S52E

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:72.30

cerebellum:-

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:153.40

spine:449.20

retina:-

eye:123.40

artery/aorta:-

vein:266.60

lymphnode:222.40

peripheral blood:182.20

spleen:37.80

thymus:51.50

bone marrow:59

adipose:-

bone:127.90

skin:105.60

GeneChip

cerebrum:8.09

cerebellum:8.23

brain stem:7.98

corpus callosum/glia:7.95

pineal gland:-

peripheral nerve:8.04

spine:7.83

retina:-

eye:-

artery/aorta:8.53

vein:8.14

lymphnode:8.59

peripheral blood:-

spleen:8.57

thymus:8.62

bone marrow:8.42

adipose:8.45

bone:-

skin:8.84

CAGE

cerebrum:4.09

cerebellum:-

brain stem:4.12

corpus callosum/glia:4.40

pineal gland:4.38

peripheral nerve:-

spine:3.75

retina:-

eye:-

artery/aorta:4.16

vein:4.43

lymphnode:4.26

peripheral blood:-

spleen:4.41

thymus:4.76

bone marrow:-

adipose:4.32

bone:-

skin:-

RNA-seq

cerebrum:0

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:112.90

prostate:45.10

ovary:149.10

testis:168.70

heart:204.30

muscle:180.80

esophagus:-

stomach:42.50

intestine:129.60

colon:178.10

liver/hepato:52.80

lung:58.70

bladder:-

kidney:62.40

pituitary:232

thyroid/parathyroid:-

adrenal gland:-

pancreas:17.80

breast:92.90

salivary:-

GeneChip

uterus:8.31

placenta:8.52

prostate:8.55

ovary:8.36

testis:10.68

heart:8.42

muscle:8.62

esophagus:8.73

stomach:8.17

intestine:8.41

colon:8.53

liver/hepato:8.35

lung:8.40

bladder:-

kidney:8.48

pituitary:8.52

thyroid/parathyroid:8.65

adrenal gland:8.58

pancreas:8.12

breast:8.72

salivary:8.43

CAGE

uterus:4.09

placenta:4.48

prostate:4.25

ovary:4.39

testis:5.80

heart:4.44

muscle:4.70

esophagus:4.28

stomach:-

intestine:4.54

colon:4.21

liver/hepato:4.82

lung:4.26

bladder:4.10

kidney:4.25

pituitary:4.03

thyroid/parathyroid:4.32

adrenal gland:-

pancreas:4.27

breast:3.95

salivary:4.45

RNA-seq

uterus:-

placenta:-

prostate:0

ovary:0

testis:0

heart:0

muscle:0

esophagus:-

stomach:-

intestine:-

colon:0

liver/hepato:0

lung:0

bladder:-

kidney:0

pituitary:-

thyroid/parathyroid:0

adrenal gland:0

pancreas:-

breast:0

salivary:-

IDs

Refseq ID	NM_004639
Gene ID	7917
Unigene ID	Hs.440900
Probe set ID	210208_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000204463
GTEx ID	ENSG00000204463

Orthologous Gene

Mouse[1]	NM_057171
Rat [0]

Chromosomal Region

HSCHR6_MHC_COX [31,594,212 - 31,607,897]

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6p21.33 [31,606,805 - 31,620,482]

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HSCHR6_MHC_MANN [31,646,291 - 31,659,974]

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HSCHR6_MHC_SSTO [31,596,744 - 31,610,423]

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HSCHR6_MHC_QBL [31,597,040 - 31,610,723]

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HSCHR6_MHC_MCF [31,683,095 - 31,696,765]

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HSCHR6_MHC_DBB [31,588,979 - 31,602,664]

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Gene Family (Interpro ID)

IPR000626	Ubiquitin
IPR019955	Ubiquitin supergroup

Gene Ontology (GO ID)

Biological Process

GO:0070059	apoptosis in response to endoplasmic reticulum stress
GO:0007420	brain development
GO:0030154	cell differentiation
GO:0016568	chromatin modification
GO:0042771	DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis
GO:0009790	embryonic development
GO:0018393	internal peptidyl-lysine acetylation
GO:0001822	kidney development
GO:0030324	lung development
GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045861	negative regulation of proteolysis
GO:0050821	protein stabilization
GO:0042127	regulation of cell proliferation
GO:0007283	spermatogenesis
GO:0007130	synaptonemal complex assembly
GO:0006810	transport
GO:0006511	ubiquitin-dependent protein catabolic process

Cellular Component

GO:0005829	cytosol
GO:0005634	nucleus

Molecular Function

GO:0030544	Hsp70 protein binding
GO:0031593	polyubiquitin binding
GO:0070628	proteasome binding
GO:0005515	protein binding
GO:0043022	ribosome binding

HLA-B associated transcript 3

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function