queuine tRNA-ribosyltransferase domain containing 1

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Synonym

FLJ12960, QTRTD1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:119.90 vein:- lymphnode:20.20 peripheral blood:- spleen:37.80 thymus:38.70 bone marrow:19.70 adipose:- bone:25.60 skin:33.60
GeneChip cerebrum:4.13 cerebellum:3.95 brain stem:4.10 corpus callosum/glia:4.45 pineal gland:- peripheral nerve:4.53 spine:4.35 retina:- eye:- artery/aorta:4.46 vein:4.25 lymphnode:5.25 peripheral blood:- spleen:5.97 thymus:4.84 bone marrow:4.66 adipose:4.61 bone:- skin:4.88
CAGE cerebrum:2.02 cerebellum:- brain stem:2.38 corpus callosum/glia:2.71 pineal gland:2.89 peripheral nerve:- spine:2.40 retina:- eye:- artery/aorta:2.05 vein:2.74 lymphnode:2.61 peripheral blood:- spleen:2.99 thymus:2.67 bone marrow:- adipose:2.87 bone:- skin:-
RNA-seq cerebrum:1.64 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.09 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.97 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:10.90 prostate:33.80 ovary:- testis:43.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:59.40     liver/hepato:10.60        lung:39.10    bladder:- kidney:62.40 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:83.60 salivary:-
GeneChip uterus:5.21 placenta:4.54 prostate:5.06 ovary:5.19 testis:5.10 heart:4.42 muscle:4.32 esophagus:4.87 stomach:4.81 intestine:4.74 colon:4.77 liver/hepato:4.56 lung:5 bladder:- kidney:4.71 pituitary:4.51 thyroid/parathyroid:4.86 adrenal gland:4.86 pancreas:4.41 breast:5.17 salivary:4.50
CAGE uterus:2.64 placenta:2.43 prostate:2.44 ovary:2.55 testis:2.69 heart:2.05 muscle:1.64 esophagus:2.50 stomach:- intestine:2.52 colon:2.31     liver/hepato:2.59    lung:2.39 bladder:2.37 kidney:2.73 pituitary:2.81 thyroid/parathyroid:2.51 adrenal gland:- pancreas:2.66 breast:2.27 salivary:2.26
RNA-seq uterus:- placenta:- prostate:2.26 ovary:3.04 testis:2.68 heart:0.97 muscle:1.09 esophagus:- stomach:- intestine:- colon:1.65     liver/hepato:1.70        lung:1.79    bladder:- kidney:2.64 pituitary:- thyroid/parathyroid:2.63 adrenal gland:2.89 pancreas:- breast:2.20 salivary:-

Gene Information

IDs

Refseq ID NM_024638
Gene ID 79691
Unigene ID Hs.477162
Probe set ID 219178_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000151576
GTEx ID ENSG00000151576

Orthologous Gene

Mouse[2]  NM_029128
Rat[2]  NM_029128

Chromosomal Region

3q13.31  [113,724,680  -  113,807,269]

Gene Family (Interpro ID)

IPR002616  Queuine/other tRNA-ribosyltransferase

Link to Pubmed  (Pubmed ID)

12477932
14702039
15174051
16009940
17207965
20354154
21044367
21131277
21139048
21890473
21906983
21963094
22505724
22797925
22939629
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008616  queuosine biosynthetic process

Cellular Component

GO:0005737  cytoplasm
GO:0005739  mitochondrion

Molecular Function

GO:0046872  metal ion binding
GO:0008479  queuine tRNA-ribosyltransferase activity