amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8

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Synonym

Testis development protein NYD-SP24, DKFZp667N246, CaRF, ALS2CR8, NYD-SP24, FLJ21579, Calcium-response factor, CARF

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:66.40 cerebellum:37.80 brain stem:- corpus callosum/glia:- pineal gland:148.30 peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:30 vein:- lymphnode:- peripheral blood:- spleen:- thymus:64.40 bone marrow:- adipose:- bone:25.60 skin:9.60
GeneChip cerebrum:3.54 cerebellum:3.28 brain stem:3.61 corpus callosum/glia:4.08 pineal gland:- peripheral nerve:3.35 spine:3.75 retina:- eye:- artery/aorta:3.19 vein:3.17 lymphnode:3.26 peripheral blood:- spleen:3.61 thymus:4.66 bone marrow:3.13 adipose:3.04 bone:- skin:3.04
CAGE cerebrum:3.08 cerebellum:- brain stem:3.35 corpus callosum/glia:3.33 pineal gland:3.16 peripheral nerve:- spine:3.31 retina:- eye:- artery/aorta:2.39 vein:2.62 lymphnode:2.58 peripheral blood:- spleen:2.20 thymus:3.04 bone marrow:- adipose:2.19 bone:- skin:-
RNA-seq cerebrum:0.22 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.51 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.17 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:32.80 prostate:- ovary:- testis:99.50 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:33.90     liver/hepato:-        lung:39.10    bladder:125.60 kidney:20.80 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:9.30 salivary:-
GeneChip uterus:3.51 placenta:3.61 prostate:3.60 ovary:3.56 testis:5.90 heart:3.18 muscle:3.14 esophagus:3.17 stomach:3.12 intestine:3.23 colon:3.01 liver/hepato:3.08 lung:3.10 bladder:- kidney:3.23 pituitary:3.56 thyroid/parathyroid:3.53 adrenal gland:3.17 pancreas:2.75 breast:3.21 salivary:3.10
CAGE uterus:2.92 placenta:2.38 prostate:2.51 ovary:2.04 testis:3.30 heart:1.90 muscle:2.04 esophagus:2.03 stomach:- intestine:2.36 colon:1.99     liver/hepato:1.66    lung:2.39 bladder:2.27 kidney:2.45 pituitary:3.27 thyroid/parathyroid:2.63 adrenal gland:- pancreas:1.74 breast:2.19 salivary:2.26
RNA-seq uterus:- placenta:- prostate:0.44 ovary:0.42 testis:0.63 heart:0.09 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.05     liver/hepato:0.08        lung:0.23    bladder:- kidney:0.11 pituitary:- thyroid/parathyroid:0.27 adrenal gland:0.10 pancreas:- breast:0.08 salivary:-

Gene Information

IDs

Refseq ID NM_024744
Gene ID 79800
Unigene ID Hs.444982
Probe set ID 219834_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000138380
GTEx ID ENSG00000138380

Orthologous Gene

Mouse[1]  NM_139150
Rat[1]  NM_001106915

Chromosomal Region

2q33.2  [203,776,937  -  203,851,060]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
11586298
11832226
12154087
12477932
14702039
15489334
15815621
16189514
16344560
18555516
21832049
22446626

Gene Ontology  (GO ID)

Biological Process

GO:0071277  cellular response to calcium ion
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0003700  transcription factor activity