SAFB-like, transcription modulator

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Synonym

Met, SLTM, FLJ13213, FLJ10005, SAFB-like, transcription modulator, DKFZp762G052

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:48.60 cerebellum:25.20 brain stem:- corpus callosum/glia:58.30 pineal gland:445 peripheral nerve:153.40 spine:336.90 retina:237.30 eye:76.40 artery/aorta:30 vein:133.30 lymphnode:202.20 peripheral blood:18.20 spleen:94.50 thymus:51.50 bone marrow:157.40 adipose:80.70 bone:64 skin:124.80
GeneChip cerebrum:7.16 cerebellum:7.17 brain stem:7.23 corpus callosum/glia:7.61 pineal gland:- peripheral nerve:7.22 spine:7.25 retina:- eye:- artery/aorta:7.49 vein:6.82 lymphnode:8.07 peripheral blood:- spleen:8.01 thymus:8.77 bone marrow:7.49 adipose:7.64 bone:- skin:7.87
CAGE cerebrum:4.16 cerebellum:- brain stem:4.41 corpus callosum/glia:4.07 pineal gland:4.69 peripheral nerve:- spine:4.59 retina:- eye:- artery/aorta:3.61 vein:4.11 lymphnode:3.99 peripheral blood:- spleen:4.30 thymus:4.49 bone marrow:- adipose:4.27 bone:- skin:-
RNA-seq cerebrum:3.33 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.98 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.64 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:109.40 placenta:54.60 prostate:101.40 ovary:- testis:38.90 heart:114.90 muscle:60.30 esophagus:- stomach:106.20 intestine:194.40 colon:101.80     liver/hepato:137.20        lung:83.10    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:101.60 pancreas:26.70 breast:83.60 salivary:328.40
GeneChip uterus:7.82 placenta:7.58 prostate:8.13 ovary:7.78 testis:7.26 heart:6.96 muscle:7.66 esophagus:7.65 stomach:7.58 intestine:6.97 colon:6.24 liver/hepato:7.34 lung:7.64 bladder:- kidney:6.94 pituitary:7.73 thyroid/parathyroid:7.95 adrenal gland:7.11 pancreas:5.84 breast:7.74 salivary:7.34
CAGE uterus:4.21 placenta:4.34 prostate:4.11 ovary:3.82 testis:3.85 heart:4.26 muscle:4.31 esophagus:4.01 stomach:- intestine:4.11 colon:3.98     liver/hepato:3.75    lung:3.97 bladder:4.19 kidney:4.16 pituitary:4.47 thyroid/parathyroid:4.11 adrenal gland:- pancreas:3.34 breast:4.34 salivary:3.73
RNA-seq uterus:- placenta:- prostate:3.25 ovary:4.07 testis:4.11 heart:3.38 muscle:3.01 esophagus:- stomach:- intestine:- colon:3.43     liver/hepato:1.42        lung:1.62    bladder:- kidney:3.60 pituitary:- thyroid/parathyroid:3.53 adrenal gland:3.66 pancreas:- breast:3.81 salivary:-

Gene Information

IDs

Refseq ID NM_024755
Gene ID 79811
Unigene ID Hs.512932
Probe set ID 217828_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000137776
GTEx ID ENSG00000137776

Orthologous Gene

Mouse[2]  NM_025690, NM_026337
Rat[2]  NM_025690, NM_026337

Chromosomal Region

15q22.1  [59,171,244  -  59,225,886]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

12477932
14702039
15840729
18029348
18781797
19086053
19471022
20811636
21139048
21182207
22586326
22939629
23000965
24250222
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006915  apoptosis
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus

Molecular Function

GO:0000166  nucleotide binding
GO:0003723  RNA binding