gem (nuclear organelle) associated protein 6

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Synonym

FLJ23459, Gem-associated protein 6, GEMIN6, SIP2, Gemin-6, gem (nuclear organelle) associated protein 6

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:5.90 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:17.60 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:40.30 bone:- skin:9.60
GeneChip cerebrum:5.24 cerebellum:5.12 brain stem:5.41 corpus callosum/glia:5.18 pineal gland:- peripheral nerve:5.55 spine:5.23 retina:- eye:- artery/aorta:5.53 vein:5.68 lymphnode:5.82 peripheral blood:- spleen:5.48 thymus:6.01 bone marrow:5.46 adipose:5.69 bone:- skin:5.60
CAGE cerebrum:2.78 cerebellum:- brain stem:2.68 corpus callosum/glia:2.52 pineal gland:2.82 peripheral nerve:- spine:2.90 retina:- eye:- artery/aorta:2.32 vein:2.69 lymphnode:2.76 peripheral blood:- spleen:2.77 thymus:2.73 bone marrow:- adipose:2.53 bone:- skin:-
RNA-seq cerebrum:2.97 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.01 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.85 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:18.20 prostate:11.30 ovary:- testis:8.70 heart:- muscle:- esophagus:- stomach:- intestine:32.40 colon:8.50     liver/hepato:10.60        lung:4.90    bladder:- kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:9.30 salivary:-
GeneChip uterus:5.94 placenta:5.07 prostate:5.77 ovary:6.43 testis:7.40 heart:5.52 muscle:5.28 esophagus:5.66 stomach:5.74 intestine:5.83 colon:5.72 liver/hepato:5.90 lung:5.53 bladder:- kidney:5.91 pituitary:5.75 thyroid/parathyroid:5.56 adrenal gland:5.92 pancreas:5.79 breast:5.77 salivary:5.53
CAGE uterus:2.79 placenta:2.36 prostate:2.67 ovary:2.73 testis:3.58 heart:2.47 muscle:2.65 esophagus:2.83 stomach:- intestine:2.70 colon:2.62     liver/hepato:3.10    lung:2.30 bladder:2.75 kidney:2.89 pituitary:2.75 thyroid/parathyroid:2.88 adrenal gland:- pancreas:3.16 breast:2.34 salivary:2.85
RNA-seq uterus:- placenta:- prostate:3.37 ovary:3.96 testis:4.81 heart:2.15 muscle:2.66 esophagus:- stomach:- intestine:- colon:3.61     liver/hepato:3.84        lung:2.43    bladder:- kidney:3.54 pituitary:- thyroid/parathyroid:3.56 adrenal gland:3.63 pancreas:- breast:3.28 salivary:-

Gene Information

IDs

Refseq ID NM_024775
Gene ID 79833
Unigene ID Hs.143818
Probe set ID 219539_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000152147
GTEx ID ENSG00000152147

Orthologous Gene

Mouse[1]  NM_026053
Rat [0]  

Chromosomal Region

2p22.1  [38,978,676  -  39,009,598]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10531003
11748230
12065586
12477932
14702039
15130578
15489334
15815621
15848170
15939020
17023415
18984161
19322201
19596235
19928837
21139048
21890473
21906983
22190034
22678362
23000965
23221635
23956138

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0034660  ncRNA metabolic process
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0016070  RNA metabolic process
GO:0000387  spliceosomal snRNP assembly
GO:0000245  spliceosome assembly

Cellular Component

GO:0015030  Cajal body
GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0016604  nuclear body
GO:0005654  nucleoplasm
GO:0005681  spliceosomal complex

Molecular Function

GO:0005515  protein binding