TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)

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Synonym

FLJ12687, CXorf34, chromosome X open reading frame 34, dJ341D10.3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:19 cerebellum:- brain stem:- corpus callosum/glia:87.50 pineal gland:148.30 peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:89.90 vein:- lymphnode:20.20 peripheral blood:18.20 spleen:37.80 thymus:51.50 bone marrow:19.70 adipose:121 bone:12.80 skin:43.20
GeneChip cerebrum:6.03 cerebellum:6.08 brain stem:6.06 corpus callosum/glia:5.96 pineal gland:- peripheral nerve:6.66 spine:6.16 retina:- eye:- artery/aorta:6.52 vein:6.26 lymphnode:7.17 peripheral blood:- spleen:7.55 thymus:7.64 bone marrow:6.80 adipose:6.37 bone:- skin:6.19
CAGE cerebrum:2.10 cerebellum:- brain stem:2.28 corpus callosum/glia:2.04 pineal gland:2.05 peripheral nerve:- spine:2.18 retina:- eye:- artery/aorta:2.22 vein:2.25 lymphnode:2.52 peripheral blood:- spleen:2.40 thymus:2.69 bone marrow:- adipose:2.08 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.83 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:21.90 prostate:45.10 ovary:37.30 testis:- heart:12.80 muscle:20.10 esophagus:- stomach:42.50 intestine:32.40 colon:33.90     liver/hepato:10.60        lung:14.70    bladder:125.60 kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip uterus:6.32 placenta:6.08 prostate:6.47 ovary:6.35 testis:5.72 heart:6.28 muscle:6.12 esophagus:6.56 stomach:6.84 intestine:6.49 colon:6.88 liver/hepato:6.52 lung:6.66 bladder:- kidney:6.84 pituitary:6.80 thyroid/parathyroid:7.17 adrenal gland:6.69 pancreas:6.10 breast:6.72 salivary:6.80
CAGE uterus:2.33 placenta:1.84 prostate:2.27 ovary:2.07 testis:1.77 heart:2.09 muscle:1.68 esophagus:2.15 stomach:- intestine:2.49 colon:2.61     liver/hepato:2.03    lung:2.24 bladder:1.80 kidney:2.13 pituitary:2.63 thyroid/parathyroid:2.49 adrenal gland:- pancreas:2.08 breast:1.68 salivary:2.88
RNA-seq uterus:- placenta:- prostate:0.38 ovary:1.18 testis:0.00 heart:0.19 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.41     liver/hepato:0.00        lung:0.04    bladder:- kidney:0.64 pituitary:- thyroid/parathyroid:1.66 adrenal gland:0.76 pancreas:- breast:0.66 salivary:-

Gene Information

IDs

Refseq ID NM_001167970
Gene ID 79979
Unigene ID Hs.496501
Probe set ID 205238_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000188917
GTEx ID ENSG00000188917

Orthologous Gene

Mouse[3]  NM_001167994, NM_001167995, NM_172540
Rat[3]  NM_001167994, NM_001167995, NM_172540

Chromosomal Region

Xq22.1  [100,264,335  -  100,307,105]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
16344560
21139048
24250222

Gene Ontology  (GO ID)

Cellular Component

GO:0005739  mitochondrion

Molecular Function

GO:0030697  S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity