sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

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Synonym

CCP22, C9orf13, FLJ13529, bA427L11.3, chromosome 9 open reading frame 13, FLJ16013, POLYDOM, SEL-OB, FLJ90719, SVEP1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.70 cerebellum:50.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:112.30 retina:- eye:41.10 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:75.60 thymus:25.80 bone marrow:- adipose:161.30 bone:127.90 skin:57.60
GeneChip cerebrum:6.29 cerebellum:7.03 brain stem:6.31 corpus callosum/glia:6.31 pineal gland:- peripheral nerve:7.03 spine:6.26 retina:- eye:- artery/aorta:7.47 vein:7.65 lymphnode:7.33 peripheral blood:- spleen:7.47 thymus:6.32 bone marrow:6.83 adipose:9 bone:- skin:7.56
CAGE cerebrum:1.45 cerebellum:- brain stem:1.50 corpus callosum/glia:1.34 pineal gland:0.21 peripheral nerve:- spine:0.46 retina:- eye:- artery/aorta:3.24 vein:2.91 lymphnode:2.37 peripheral blood:- spleen:2.70 thymus:0.28 bone marrow:- adipose:4.29 bone:- skin:-
RNA-seq cerebrum:0.63 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.81 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.71 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:1031 prostate:22.50 ovary:- testis:34.60 heart:38.30 muscle:20.10 esophagus:- stomach:- intestine:64.80 colon:8.50     liver/hepato:10.60        lung:39.10    bladder:- kidney:62.40 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:17.80 breast:83.60 salivary:-
GeneChip uterus:7.83 placenta:11.57 prostate:6.28 ovary:6.97 testis:5.92 heart:7.72 muscle:6.72 esophagus:6.93 stomach:7.61 intestine:7.55 colon:7.77 liver/hepato:6.54 lung:8.55 bladder:- kidney:6.64 pituitary:6.18 thyroid/parathyroid:7.07 adrenal gland:7.24 pancreas:7.11 breast:7.88 salivary:6.27
CAGE uterus:3.48 placenta:6.23 prostate:2.98 ovary:2.91 testis:2.01 heart:2.76 muscle:2.54 esophagus:3.06 stomach:- intestine:2.25 colon:3.22     liver/hepato:1.54    lung:3.42 bladder:3.71 kidney:1.97 pituitary:0.58 thyroid/parathyroid:2.58 adrenal gland:- pancreas:2.34 breast:3.92 salivary:1.75
RNA-seq uterus:- placenta:- prostate:3.92 ovary:2.04 testis:3.00 heart:1.96 muscle:1.93 esophagus:- stomach:- intestine:- colon:4.84     liver/hepato:0.70        lung:3.93    bladder:- kidney:2.14 pituitary:- thyroid/parathyroid:2.61 adrenal gland:3.66 pancreas:- breast:3.80 salivary:-

Gene Information

IDs

Refseq ID NM_153366
Gene ID 79987
Unigene ID Hs.522334
Probe set ID 213247_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000165124
GTEx ID ENSG00000165124

Orthologous Gene

Mouse[1]  NM_022814
Rat[1]  NM_022814

Chromosomal Region

9q31.3  [113,127,531  -  113,342,160]

Gene Family (Interpro ID)

IPR001881  EGF-like calcium-binding
IPR000742  EGF-like, type 3
IPR000436  Sushi/SCR/CCP

Link to Pubmed  (Pubmed ID)

10737800
11062057
12477932
14702039
15231748
16206243
18029348
18711365
20236627
20361209
20379614
20834067
21556780
22424883
22654117
23386860

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion

Cellular Component

GO:0005737  cytoplasm
GO:0005576  extracellular region
GO:0016020  membrane

Molecular Function

GO:0005509  calcium ion binding
GO:0003682  chromatin binding