zinc finger protein 556

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Synonym

zinc finger protein 556, ZNF556, FLJ11637

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:2.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.96 cerebellum:5.51 brain stem:5.05 corpus callosum/glia:4.99 pineal gland:- peripheral nerve:4.68 spine:4.79 retina:- eye:- artery/aorta:4.62 vein:5.16 lymphnode:4.69 peripheral blood:- spleen:4.48 thymus:4.34 bone marrow:4.82 adipose:4.84 bone:- skin:4.86
CAGE cerebrum:0.49 cerebellum:- brain stem:0.40 corpus callosum/glia:0 pineal gland:0.55 peripheral nerve:- spine:0.09 retina:- eye:- artery/aorta:0.18 vein:0.18 lymphnode:0.26 peripheral blood:- spleen:0 thymus:0.33 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:0.09 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.01 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:37.30 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.87 placenta:4.70 prostate:4.39 ovary:5.83 testis:4.80 heart:5.02 muscle:5.32 esophagus:5.01 stomach:4.86 intestine:5.03 colon:5.18 liver/hepato:4.97 lung:4.76 bladder:- kidney:5.07 pituitary:4.68 thyroid/parathyroid:4.53 adrenal gland:4.84 pancreas:5.30 breast:4.50 salivary:4.95
CAGE uterus:0.61 placenta:0.43 prostate:0 ovary:1.89 testis:1.22 heart:0 muscle:1.15 esophagus:1.11 stomach:- intestine:0 colon:0.08     liver/hepato:0    lung:0.17 bladder:0 kidney:0.95 pituitary:0.38 thyroid/parathyroid:0 adrenal gland:- pancreas:0.94 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0 ovary:1.64 testis:0.37 heart:0.01 muscle:0.31 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0.16    bladder:- kidney:0.32 pituitary:- thyroid/parathyroid:0.26 adrenal gland:0.01 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_024967
Gene ID 80032
Unigene ID Hs.287433
Probe set ID 220709_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000172000
GTEx ID ENSG00000172000

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

19p13.3  [2,867,333  -  2,878,501]

Gene Family (Interpro ID)

IPR001909  Krueppel-associated box
IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
19322201
20211142
22082156

Gene Ontology  (GO ID)

Biological Process

GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0046872  metal ion binding