ribosome production factor 1 homolog (S. cerevisiae)

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Synonym

RP11-118B23.1, DKFZp761M0215, DKFZp761G0415, RPF1, Ribosome production factor 1, brix domain containing 5, FLJ12475, Ribosome biogenesis protein RPF1, BXDC5, Brix domain-containing protein 5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.70 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:58.80 artery/aorta:30 vein:133.30 lymphnode:182 peripheral blood:- spleen:18.90 thymus:12.90 bone marrow:- adipose:- bone:38.40 skin:62.40
GeneChip cerebrum:6.63 cerebellum:6.30 brain stem:6.60 corpus callosum/glia:6.26 pineal gland:- peripheral nerve:6.60 spine:6.50 retina:- eye:- artery/aorta:6.93 vein:6.84 lymphnode:7.30 peripheral blood:- spleen:7.34 thymus:8.15 bone marrow:6.61 adipose:6.96 bone:- skin:7.30
CAGE cerebrum:3.35 cerebellum:- brain stem:3.32 corpus callosum/glia:3.10 pineal gland:3.49 peripheral nerve:- spine:3.30 retina:- eye:- artery/aorta:3.22 vein:3.63 lymphnode:3.52 peripheral blood:- spleen:3.99 thymus:3.78 bone marrow:- adipose:3.46 bone:- skin:-
RNA-seq cerebrum:3.19 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.64 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.26 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:18.20 prostate:45.10 ovary:149.10 testis:26 heart:38.30 muscle:80.40 esophagus:- stomach:169.90 intestine:32.40 colon:42.40     liver/hepato:63.30        lung:24.40    bladder:- kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:37.20 salivary:-
GeneChip uterus:7.52 placenta:6.63 prostate:7.74 ovary:7.55 testis:7.97 heart:7.22 muscle:7.66 esophagus:7.30 stomach:6.96 intestine:7.07 colon:6.94 liver/hepato:6.83 lung:7.16 bladder:- kidney:6.91 pituitary:6.90 thyroid/parathyroid:7.24 adrenal gland:6.95 pancreas:6.44 breast:7.18 salivary:6.94
CAGE uterus:3.53 placenta:3.43 prostate:3.73 ovary:3.69 testis:4.08 heart:3.94 muscle:4.39 esophagus:3.75 stomach:- intestine:3.60 colon:3.24     liver/hepato:3.81    lung:3.48 bladder:3.89 kidney:3.93 pituitary:3.91 thyroid/parathyroid:3.81 adrenal gland:- pancreas:3.37 breast:3.16 salivary:3.32
RNA-seq uterus:- placenta:- prostate:3.96 ovary:4.05 testis:4.60 heart:3.33 muscle:3.61 esophagus:- stomach:- intestine:- colon:4.31     liver/hepato:3.47        lung:3.68    bladder:- kidney:3.86 pituitary:- thyroid/parathyroid:4.41 adrenal gland:4.01 pancreas:- breast:3.48 salivary:-

Gene Information

IDs

Refseq ID NM_025065
Gene ID 80135
Unigene ID Hs.481202
Probe set ID 218462_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000117133
GTEx ID ENSG00000117133

Orthologous Gene

Mouse[2]  NM_027332, NM_027371
Rat [0]  

Chromosomal Region

1p22.3  [84,944,942  -  84,963,473]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11790298
11864606
12429849
12477932
14702039
15489334
16710414
17207965
21139048
21906983
21963094
22505724
23000965
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006364  rRNA processing

Cellular Component

GO:0005730  nucleolus

Molecular Function

GO:0003723  RNA binding
GO:0019843  rRNA binding