cysteine and glycine-rich protein 3 (cardiac LIM protein)

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Synonym

MGC14488, LMO4, Cysteine-rich protein 3, MGC61993, Cysteine and glycine-rich protein 3, Muscle LIM protein, LIM domain protein, cardiac, CSRP3, CMD1M

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:201.70 bone:- skin:9.60
GeneChip cerebrum:3.41 cerebellum:3.55 brain stem:3.41 corpus callosum/glia:3.44 pineal gland:- peripheral nerve:3.43 spine:3.34 retina:- eye:- artery/aorta:4.26 vein:6.87 lymphnode:3.40 peripheral blood:- spleen:3.43 thymus:3.48 bone marrow:3.56 adipose:3.39 bone:- skin:4.55
CAGE cerebrum:0.01 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0.59 vein:2.66 lymphnode:1.19 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:1.12 bone:- skin:-
RNA-seq cerebrum:0.07 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.39 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:78.90 ovary:- testis:8.70 heart:791.80 muscle:944.20 esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:39.10    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:- salivary:-
GeneChip uterus:3.29 placenta:3.39 prostate:3.52 ovary:3.42 testis:3.22 heart:9.07 muscle:11.37 esophagus:7.68 stomach:3.35 intestine:4.92 colon:3.39 liver/hepato:3.51 lung:3.48 bladder:- kidney:3.43 pituitary:3.40 thyroid/parathyroid:3.56 adrenal gland:4.20 pancreas:3.60 breast:3.33 salivary:3.47
CAGE uterus:0 placenta:0 prostate:0.44 ovary:0 testis:0.21 heart:5.75 muscle:6.01 esophagus:2.34 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:1.56 adrenal gland:- pancreas:0 breast:0 salivary:1.39
RNA-seq uterus:- placenta:- prostate:0 ovary:0.06 testis:3.77 heart:9.29 muscle:4.80 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.03        lung:0.12    bladder:- kidney:0 pituitary:- thyroid/parathyroid:7.76 adrenal gland:0.02 pancreas:- breast:3.57 salivary:-

Gene Information

IDs

Refseq ID NM_001127656
Gene ID 8048
Unigene ID Hs.83577
Probe set ID 205553_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000129170
GTEx ID ENSG00000129170

Orthologous Gene

Mouse[1]  NM_001198841, NM_013808
Rat [0]  

Chromosomal Region

11p15.1  [19,203,578  -  19,232,120]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7490106
7499425
7954791
8782062
9234731
10751147
11113014
12127981
12477932
12507422
12642359
12878195
15489334
15582318
17519359
18250163
18331358
18393774
18505755
18513529
19035361
19230835
19293840
19351738
19412328
19636821
19752190
19875404
19913121
20044516
20201937
20301486
20301725
20474083
20628086
22584587

Gene Ontology  (GO ID)

Biological Process

GO:0060048  cardiac muscle contraction
GO:0003300  cardiac muscle hypertrophy
GO:0048738  cardiac muscle tissue development
GO:0055003  cardiac myofibril assembly
GO:0006874  cellular calcium ion homeostasis
GO:0033365  protein localization in organelle
GO:0002026  regulation of the force of heart contraction
GO:0007519  skeletal muscle tissue development

Cellular Component

GO:0005856  cytoskeleton
GO:0005634  nucleus
GO:0030018  Z disc

Molecular Function

GO:0042805  actinin binding
GO:0005515  protein binding
GO:0008307  structural constituent of muscle
GO:0031433  telethonin binding
GO:0008270  zinc ion binding