solute carrier family 38, member 1

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Synonym

SNAT1, solute carrier family 38, member 1, ATA1, SLC38A1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:7.90 cerebellum:9.17 brain stem:8.33 corpus callosum/glia:7.53 pineal gland:- peripheral nerve:6.81 spine:9.18 retina:- eye:- artery/aorta:6.42 vein:6.69 lymphnode:8.18 peripheral blood:- spleen:8.54 thymus:9.24 bone marrow:6.85 adipose:6 bone:- skin:7.37
CAGE cerebrum:4.11 cerebellum:- brain stem:4.29 corpus callosum/glia:4.26 pineal gland:4.04 peripheral nerve:- spine:4.72 retina:- eye:- artery/aorta:3.62 vein:4.25 lymphnode:4.48 peripheral blood:- spleen:4.06 thymus:4.56 bone marrow:- adipose:2.88 bone:- skin:-
RNA-seq cerebrum:4.75 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.34 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.35 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.07 placenta:9.49 prostate:8.11 ovary:6.94 testis:4.13 heart:8.17 muscle:7.32 esophagus:7.99 stomach:7.84 intestine:7.30 colon:8.11 liver/hepato:5.41 lung:6.21 bladder:- kidney:7.05 pituitary:8 thyroid/parathyroid:7.80 adrenal gland:5.39 pancreas:7.53 breast:8.27 salivary:7.08
CAGE uterus:3.71 placenta:5.30 prostate:3.44 ovary:3.81 testis:2.30 heart:4.11 muscle:4.38 esophagus:4.14 stomach:- intestine:3.57 colon:3.85     liver/hepato:3.12    lung:3.33 bladder:3.71 kidney:3.64 pituitary:4.54 thyroid/parathyroid:3.70 adrenal gland:- pancreas:4.40 breast:3.16 salivary:3.75
RNA-seq uterus:- placenta:- prostate:3.98 ovary:4.11 testis:2.27 heart:4.75 muscle:5.43 esophagus:- stomach:- intestine:- colon:3.95     liver/hepato:2.29        lung:2.43    bladder:- kidney:4.26 pituitary:- thyroid/parathyroid:5.31 adrenal gland:4.62 pancreas:- breast:2.32 salivary:-

Gene Information

IDs

Refseq ID NM_001077484
Gene ID 81539
Unigene ID -
Probe set ID 218237_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000111371
GTEx ID ENSG00000111371

Orthologous Gene

Mouse[6]  NM_001166456, NM_001166458, NM_134086
Rat[1]  NM_138832, NM_001166458, NM_134086

Chromosomal Region

12q13.11  [46,581,584  -  46,663,800]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7750094
8125298
10891391
11325958
12477932
14702039
15054072
16303743
16344560
16516348
17549407
18195088
18703994
19442705
20308991
20379614
20599747
20605601
21139048
21219957
21890473
21906983
21963094
21987572
23848995

Gene Ontology  (GO ID)

Biological Process

GO:0006865  amino acid transport
GO:0006811  ion transport
GO:0001504  neurotransmitter uptake
GO:0015804  neutral amino acid transport
GO:0007268  synaptic transmission
GO:0055085  transmembrane transport

Cellular Component

GO:0030424  axon
GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0015186  L-glutamine transmembrane transporter activity
GO:0015175  neutral amino acid transmembrane transporter activity
GO:0005283  sodium:amino acid symporter activity