extended synaptotagmin-like protein 3

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Synonym

FAM62C, CHR3SYT

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.70 cerebellum:63 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:12.90 bone marrow:- adipose:- bone:- skin:4.80
GeneChip nodata
CAGE cerebrum:1.74 cerebellum:- brain stem:1.52 corpus callosum/glia:0.82 pineal gland:0.98 peripheral nerve:- spine:1.21 retina:- eye:- artery/aorta:0.95 vein:0 lymphnode:0.22 peripheral blood:- spleen:0 thymus:0.18 bone marrow:- adipose:0.14 bone:- skin:-
RNA-seq cerebrum:0.69 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.11 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:18.20 prostate:- ovary:- testis:26 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:17     liver/hepato:-        lung:4.90    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:1.29 placenta:1.05 prostate:1.00 ovary:0.07 testis:0.90 heart:0.49 muscle:0.30 esophagus:0.33 stomach:- intestine:0.33 colon:1.24     liver/hepato:0    lung:2.40 bladder:1.49 kidney:0.49 pituitary:1.67 thyroid/parathyroid:1.98 adrenal gland:- pancreas:1.21 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:1.34 ovary:0.19 testis:0.45 heart:0.11 muscle:0.04 esophagus:- stomach:- intestine:- colon:0.67     liver/hepato:0.02        lung:1.88    bladder:- kidney:0.29 pituitary:- thyroid/parathyroid:1.10 adrenal gland:0.06 pancreas:- breast:0.20 salivary:-

Gene Information

IDs

Refseq ID NM_031913
Gene ID 83850
Unigene ID Hs.477711
Probe set ID -
Ensembl ID ENSG00000158220
GTEx ID ENSG00000158220

Orthologous Gene

Mouse[1]  NM_177775
Rat[1]  NM_177775

Chromosomal Region

3q22.3  [138,153,428  -  138,200,528]

Gene Family (Interpro ID)

IPR000008  C2 calcium-dependent membrane targeting
IPR008973  C2 calcium/lipid-binding domain, CaLB
IPR018029  C2 membrane targeting protein

Link to Pubmed  (Pubmed ID)

10737800
11543631
12477932
15238157
16344560
17360437
17672888
21733517
23791178

Gene Ontology  (GO ID)

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane