AT rich interactive domain 5B (MRF1-like)

 jump to detail

Synonym

MRF2, DESRT, AT-rich interactive domain-containing protein 5B, Mrf1-like, FLJ21150, ARID5B, AT rich interactive domain 5B (MRF1-like), ARID domain-containing protein 5B, Modulator recognition factor 2, MRF-2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:26.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:245.40 spine:- retina:- eye:88.20 artery/aorta:- vein:- lymphnode:70.80 peripheral blood:- spleen:18.90 thymus:103.10 bone marrow:157.40 adipose:40.30 bone:12.80 skin:129.60
GeneChip cerebrum:7.68 cerebellum:5.84 brain stem:7.20 corpus callosum/glia:7.98 pineal gland:- peripheral nerve:7.83 spine:7.40 retina:- eye:- artery/aorta:8.47 vein:9.47 lymphnode:8.14 peripheral blood:- spleen:7.97 thymus:7.45 bone marrow:6.02 adipose:8.73 bone:- skin:8.31
CAGE cerebrum:4.17 cerebellum:- brain stem:4.38 corpus callosum/glia:4.40 pineal gland:4.26 peripheral nerve:- spine:4.62 retina:- eye:- artery/aorta:5.24 vein:4.82 lymphnode:4.84 peripheral blood:- spleen:4.65 thymus:4.05 bone marrow:- adipose:5.85 bone:- skin:-
RNA-seq cerebrum:1.14 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.36 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.08 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:182.30 placenta:72.90 prostate:247.80 ovary:37.30 testis:26 heart:63.90 muscle:100.50 esophagus:- stomach:21.20 intestine:- colon:169.60     liver/hepato:137.20        lung:83.10    bladder:125.60 kidney:114.40 pituitary:232 thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:204.40 salivary:-
GeneChip uterus:9.26 placenta:9.10 prostate:8.96 ovary:8.76 testis:7.33 heart:8.37 muscle:8.78 esophagus:7.88 stomach:7.86 intestine:7.91 colon:7.47 liver/hepato:5.87 lung:8.05 bladder:- kidney:8.18 pituitary:8 thyroid/parathyroid:6.74 adrenal gland:7.33 pancreas:6.71 breast:8.99 salivary:7.30
CAGE uterus:5.37 placenta:5.12 prostate:4.95 ovary:4.97 testis:4.27 heart:4.95 muscle:6.23 esophagus:4.54 stomach:- intestine:3.74 colon:4.12     liver/hepato:3.37    lung:4.45 bladder:5.18 kidney:4.34 pituitary:4.55 thyroid/parathyroid:3.31 adrenal gland:- pancreas:2.98 breast:5.16 salivary:4.03
RNA-seq uterus:- placenta:- prostate:0.97 ovary:0.58 testis:1.16 heart:0.24 muscle:0.42 esophagus:- stomach:- intestine:- colon:0.53     liver/hepato:0.47        lung:1.47    bladder:- kidney:0.54 pituitary:- thyroid/parathyroid:0.07 adrenal gland:1.28 pancreas:- breast:0.86 salivary:-

Gene Information

IDs

Refseq ID NM_032199
Gene ID 84159
Unigene ID Hs.535297
Probe set ID 212614_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000150347
GTEx ID ENSG00000150347

Orthologous Gene

Mouse[2]  NM_023598
Rat[1]  NM_001107624

Chromosomal Region

10q21.2  [63,661,059  -  63,856,703]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9808040
10329386
11478881
11483573
11959810
12477932
14702039
15164054
15489334
15640446
16009940
16344560
17000644
17081983
17407261
18612189
19322201
19430483
19684603
19684604
20042726
20054350
20460642
21145461
21532585
21693764
21889209
21890642
21906983
21963094
22291082
22446963
22660188
22922568
22971728
23016962
23022100
23118423
23273568
23291589
23382691
23512250
23608171
23667531
23692655
23752268
23975371
23996088
24013273
24561991
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0060612  adipose tissue development
GO:0030325  adrenal gland development
GO:0048468  cell development
GO:0060325  face morphogenesis
GO:0045444  fat cell differentiation
GO:0060613  fat pad development
GO:0008585  female gonad development
GO:0010761  fibroblast migration
GO:0001822  kidney development
GO:0001889  liver development
GO:0008584  male gonad development
GO:0035264  multicellular organism growth
GO:0048644  muscle organ morphogenesis
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0060021  palate development
GO:0048008  platelet-derived growth factor receptor signaling pathway
GO:0051091  positive regulation of transcription factor activity
GO:0009791  post-embryonic development
GO:0048705  skeletal system morphogenesis
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0005515  protein binding
GO:0003713  transcription coactivator activity