ATG4 autophagy related 4 homolog C (S. cerevisiae)

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Synonym

ATG4C, Cysteine protease ATG4C, APG4 autophagy 4 homolog C (S. cerevisiae), FLJ14867, Autophagin-3, ATG4 autophagy related 4 homolog C (S. cerevisiae), Autophagy-related cysteine endopeptidase 3, APG4C, AUTL3, APG4-C, AUTL1, cysteine endopeptidase; AUT-like 1, AUT-like 3 cysteine endopeptidase, Autophagy-related protein 4 homolog C

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:58.10 cerebellum:- brain stem:- corpus callosum/glia:87.50 pineal gland:- peripheral nerve:- spine:112.30 retina:- eye:11.80 artery/aorta:60 vein:- lymphnode:50.60 peripheral blood:109.30 spleen:- thymus:38.70 bone marrow:19.70 adipose:- bone:- skin:9.60
GeneChip nodata
CAGE cerebrum:4.07 cerebellum:- brain stem:4.51 corpus callosum/glia:4.51 pineal gland:3.73 peripheral nerve:- spine:4.48 retina:- eye:- artery/aorta:3.10 vein:2.98 lymphnode:3.18 peripheral blood:- spleen:3.49 thymus:3.37 bone marrow:- adipose:3.14 bone:- skin:-
RNA-seq cerebrum:1.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.41 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.29 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:25.50 prostate:- ovary:- testis:30.30 heart:- muscle:20.10 esophagus:- stomach:- intestine:64.80 colon:8.50     liver/hepato:10.60        lung:19.60    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:71.10 breast:27.90 salivary:-
GeneChip nodata
CAGE uterus:3.25 placenta:3.06 prostate:2.98 ovary:2.72 testis:3.11 heart:2.70 muscle:2.07 esophagus:2.59 stomach:- intestine:2.66 colon:2.52     liver/hepato:2.78    lung:3.10 bladder:2.86 kidney:3.00 pituitary:3.50 thyroid/parathyroid:2.92 adrenal gland:- pancreas:3.06 breast:3.24 salivary:3.26
RNA-seq uterus:- placenta:- prostate:1.56 ovary:1.11 testis:1.78 heart:1.27 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.33     liver/hepato:0.21        lung:0.78    bladder:- kidney:1.80 pituitary:- thyroid/parathyroid:0.29 adrenal gland:0.63 pancreas:- breast:0.85 salivary:-

Gene Information

IDs

Refseq ID NM_032852
Gene ID 84938
Unigene ID Hs.7353
Probe set ID -
Ensembl ID ENSG00000125703
GTEx ID ENSG00000125703

Orthologous Gene

Mouse[2]  NM_001145967, NM_175029
Rat[1]  NM_001107948, NM_175029

Chromosomal Region

1p31.3  [63,249,806  -  63,339,980]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
12446702
12477932
14702039
15489334
16344560
17442669
18029348
18193044
20562859
20966902
21139048
22248718
23000965

Gene Ontology  (GO ID)

Biological Process

GO:0000045  autophagic vacuole formation
GO:0006914  autophagy
GO:0006612  protein targeting to membrane
GO:0006508  proteolysis

Cellular Component

GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0005576  extracellular region

Molecular Function

GO:0004197  cysteine-type endopeptidase activity
GO:0008233  peptidase activity