protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2

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Synonym

MGC132572, FLJ41378, PPFIA2, PTPRF-interacting protein alpha-2, Liprin-alpha-2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:131.60 cerebellum:50.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:- retina:118.60 eye:82.30 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:6.44 cerebellum:5.36 brain stem:6.05 corpus callosum/glia:6.39 pineal gland:- peripheral nerve:4.90 spine:5.79 retina:- eye:- artery/aorta:4.74 vein:4.85 lymphnode:4.53 peripheral blood:- spleen:3.96 thymus:4.05 bone marrow:4.51 adipose:4.43 bone:- skin:4.56
CAGE cerebrum:4.01 cerebellum:- brain stem:3.26 corpus callosum/glia:3.72 pineal gland:5.13 peripheral nerve:- spine:3.45 retina:- eye:- artery/aorta:2.10 vein:0.70 lymphnode:0.26 peripheral blood:- spleen:0.09 thymus:0 bone marrow:- adipose:1.29 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:22.50 ovary:- testis:90.90 heart:- muscle:- esophagus:- stomach:- intestine:- colon:17     liver/hepato:-        lung:-    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:9.30 salivary:-
GeneChip uterus:4.54 placenta:4.46 prostate:4.55 ovary:4.37 testis:5.45 heart:4.51 muscle:4.59 esophagus:4.23 stomach:4.37 intestine:4.51 colon:4.55 liver/hepato:4.40 lung:4.36 bladder:- kidney:4.47 pituitary:5.23 thyroid/parathyroid:4.11 adrenal gland:4.53 pancreas:4.19 breast:4.11 salivary:4.49
CAGE uterus:1.66 placenta:0 prostate:1.63 ovary:0.82 testis:0.97 heart:0.82 muscle:0.34 esophagus:0.40 stomach:- intestine:0.38 colon:0.77     liver/hepato:0    lung:0.21 bladder:1.06 kidney:0.49 pituitary:2.79 thyroid/parathyroid:0.41 adrenal gland:- pancreas:0 breast:1.16 salivary:0
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.00 testis:0.00 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0        lung:0    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_003625
Gene ID 8499
Unigene ID Hs.506216
Probe set ID 206973_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000139220
GTEx ID ENSG00000139220

Orthologous Gene

Mouse[1]  NM_001205341, NM_177373
Rat[1]  NM_001108745, NM_177373

Chromosomal Region

12q21.31  [81,652,045  -  82,153,332]

Gene Family (Interpro ID)

IPR001660  Sterile alpha motif
IPR010993  Sterile alpha motif homology
IPR013761  Sterile alpha motif-type

Link to Pubmed  (Pubmed ID)

8889548
9624153
11931740
12119554
12477932
12629171
12923177
16344560
17043677
18782753
19056867
20174665
20379614
21855798
21906983
22505724
22558309
22885689
23422819
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0007160  cell-matrix adhesion

Cellular Component

GO:0009986  cell surface
GO:0005737  cytoplasm
GO:0045202  synapse

Molecular Function

GO:0005515  protein binding