synapse defective 1, Rho GTPase, homolog 1 (C. elegans)

 jump to detail

Synonym

7h3, SYDE1, FLJ13511

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:7.10 cerebellum:- brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:- spine:- retina:- eye:35.30 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:18.90 thymus:12.90 bone marrow:- adipose:40.30 bone:102.40 skin:33.60
GeneChip cerebrum:7.07 cerebellum:6.91 brain stem:7.08 corpus callosum/glia:7.02 pineal gland:- peripheral nerve:7.50 spine:7.12 retina:- eye:- artery/aorta:7.89 vein:7.72 lymphnode:7.19 peripheral blood:- spleen:7.25 thymus:6.32 bone marrow:6.96 adipose:7.64 bone:- skin:7.18
CAGE cerebrum:1.10 cerebellum:- brain stem:1.31 corpus callosum/glia:1.70 pineal gland:1.25 peripheral nerve:- spine:1.38 retina:- eye:- artery/aorta:3.07 vein:2.13 lymphnode:1.54 peripheral blood:- spleen:2.17 thymus:0.54 bone marrow:- adipose:2.87 bone:- skin:-
RNA-seq cerebrum:0.86 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.84 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.07 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:142.10 prostate:33.80 ovary:- testis:4.30 heart:38.30 muscle:- esophagus:- stomach:- intestine:- colon:17     liver/hepato:10.60        lung:24.40    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:9.30 salivary:-
GeneChip uterus:7.71 placenta:9.77 prostate:7.11 ovary:7.44 testis:6.85 heart:7.62 muscle:7.24 esophagus:7.04 stomach:7.28 intestine:7.24 colon:7.50 liver/hepato:7.06 lung:7.36 bladder:- kidney:7.50 pituitary:6.99 thyroid/parathyroid:7.20 adrenal gland:7.57 pancreas:7.08 breast:7.49 salivary:7.15
CAGE uterus:2.77 placenta:4.12 prostate:2.67 ovary:3.02 testis:1.95 heart:2.46 muscle:1.51 esophagus:2.55 stomach:- intestine:1.71 colon:1.99     liver/hepato:1.37    lung:2.10 bladder:2.70 kidney:2.15 pituitary:0.32 thyroid/parathyroid:2.19 adrenal gland:- pancreas:1.74 breast:3.22 salivary:0.83
RNA-seq uterus:- placenta:- prostate:3.17 ovary:3.67 testis:2.96 heart:1.81 muscle:0.93 esophagus:- stomach:- intestine:- colon:2.82     liver/hepato:0.88        lung:2.47    bladder:- kidney:2.51 pituitary:- thyroid/parathyroid:2.16 adrenal gland:3.17 pancreas:- breast:2.70 salivary:-

Gene Information

IDs

Refseq ID NM_033025
Gene ID 85360
Unigene ID Hs.528701
Probe set ID 44702_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000105137
GTEx ID ENSG00000105137

Orthologous Gene

Mouse[1]  NM_027875
Rat [0]  

Chromosomal Region

19p13.12  [15,218,214  -  15,225,789]

Gene Family (Interpro ID)

IPR008936  Rho GTPase activation protein
IPR000198  RhoGAP

Link to Pubmed  (Pubmed ID)

12477932
14702039
19531213
21139048

Gene Ontology  (GO ID)

Biological Process

GO:0032862  activation of Rho GTPase activity
GO:0051056  regulation of small GTPase mediated signal transduction
GO:0007264  small GTPase mediated signal transduction

Cellular Component

GO:0005829  cytosol

Molecular Function

GO:0005100  Rho GTPase activator activity