NOP14 nucleolar protein homolog (yeast)

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Synonym

RES4-25, NOP14, C4orf9, chromosome 4 open reading frame 9, Probable nucleolar complex protein 14

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.95 cerebellum:6.53 brain stem:5.95 corpus callosum/glia:5.80 pineal gland:- peripheral nerve:5.99 spine:5.80 retina:- eye:- artery/aorta:6.23 vein:6.53 lymphnode:6.86 peripheral blood:- spleen:6.82 thymus:6.61 bone marrow:6.75 adipose:6.52 bone:- skin:6.52
CAGE cerebrum:3.01 cerebellum:- brain stem:3.01 corpus callosum/glia:2.95 pineal gland:3.35 peripheral nerve:- spine:3.03 retina:- eye:- artery/aorta:3.17 vein:3.52 lymphnode:3.66 peripheral blood:- spleen:3.55 thymus:3.41 bone marrow:- adipose:3.53 bone:- skin:-
RNA-seq cerebrum:2.52 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.31 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.99 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:- salivary:-
GeneChip uterus:6.35 placenta:6.19 prostate:6.19 ovary:6.46 testis:6.10 heart:6.24 muscle:6.41 esophagus:6.89 stomach:6.56 intestine:6.56 colon:6.51 liver/hepato:7.07 lung:6.51 bladder:- kidney:6.41 pituitary:6.49 thyroid/parathyroid:6.57 adrenal gland:6.83 pancreas:7.07 breast:6.92 salivary:6.32
CAGE uterus:3.19 placenta:3.16 prostate:3.23 ovary:3.45 testis:3.07 heart:3.36 muscle:4.17 esophagus:3.33 stomach:- intestine:3.16 colon:3.16     liver/hepato:3.97    lung:3.04 bladder:3.57 kidney:3.29 pituitary:3.29 thyroid/parathyroid:3.32 adrenal gland:- pancreas:3.87 breast:3.33 salivary:3.34
RNA-seq uterus:- placenta:- prostate:3.52 ovary:3.87 testis:3.22 heart:2.75 muscle:5.15 esophagus:- stomach:- intestine:- colon:3.46     liver/hepato:3.37        lung:2.65    bladder:- kidney:3.20 pituitary:- thyroid/parathyroid:4.09 adrenal gland:3.85 pancreas:- breast:3.19 salivary:-

Gene Information

IDs

Refseq ID NM_003703
Gene ID 8602
Unigene ID Hs.627133
Probe set ID 214661_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000087269
GTEx ID ENSG00000087269

Orthologous Gene

Mouse[1]  NM_029278
Rat[1]  NM_001106013

Chromosomal Region

4p16.3  [2,939,660  -  2,965,112]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9661704
9734812
11694595
12477932
15489334
16565220
17081983
19471022
19596686
19946888
20020773
21890473
21906983
22425761
22586326
22678362
22939629
22990118
23382074
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0000480  endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447  endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472  endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462  maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042274  ribosomal small subunit biogenesis
GO:0006364  rRNA processing

Cellular Component

GO:0030686  90S preribosome
GO:0005739  mitochondrion
GO:0030692  Noc4p-Nop14p complex
GO:0005730  nucleolus
GO:0032040  small-subunit processome

Molecular Function

GO:0030515  snoRNA binding