protocadherin gamma subfamily B, 4

 jump to detail

Synonym

PCDH-gamma-B4, MGC138293, protocadherin gamma subfamily B, 4, PCDH-GAMMA-B4, FIB2, MGC142167, Protocadherin gamma B4 precursor, PCDHGB4, Cadherin-20, Fibroblast cadherin 2, CDH20

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:10.18 cerebellum:10.08 brain stem:9.69 corpus callosum/glia:10.42 pineal gland:- peripheral nerve:9.53 spine:10.87 retina:- eye:- artery/aorta:9.49 vein:9.19 lymphnode:8.37 peripheral blood:- spleen:8.44 thymus:7.76 bone marrow:7.75 adipose:9.25 bone:- skin:8.85
CAGE nodata
RNA-seq cerebrum:0.43 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:9.31 placenta:8.27 prostate:8.60 ovary:8.97 testis:8.59 heart:8.88 muscle:7.23 esophagus:8.80 stomach:8.86 intestine:8.32 colon:8.64 liver/hepato:8.08 lung:9.49 bladder:- kidney:8.47 pituitary:9.81 thyroid/parathyroid:9.03 adrenal gland:9.40 pancreas:7.59 breast:9.47 salivary:8.51
CAGE nodata
RNA-seq uterus:- placenta:- prostate:0 ovary:0.37 testis:0.00 heart:0.61 muscle:0.49 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.19        lung:0.51    bladder:- kidney:0.51 pituitary:- thyroid/parathyroid:0 adrenal gland:0.27 pancreas:- breast:0.35 salivary:-

Gene Information

IDs

Refseq ID NM_032098
Gene ID 8641
Unigene ID -
Probe set ID 211066_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000253953
GTEx ID ENSG00000253953

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

5q31.3  [140,767,452  -  140,892,546]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

9199196
10380929
10716726
10817752
10835267
11230163
12477932

Gene Ontology  (GO ID)

Biological Process

GO:0016339  calcium-dependent cell-cell adhesion
GO:0007155  cell adhesion
GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0016020  membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding