syntaxin 16

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Synonym

SYN16, Syntaxin-16, Syn16, STX16, MGC90328, syntaxin 16, hsyn16

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:55.70 cerebellum:50.40 brain stem:- corpus callosum/glia:58.30 pineal gland:148.30 peripheral nerve:61.30 spine:- retina:237.30 eye:70.50 artery/aorta:30 vein:- lymphnode:141.50 peripheral blood:36.40 spleen:151.30 thymus:103.10 bone marrow:59 adipose:- bone:51.20 skin:67.20
GeneChip cerebrum:8.39 cerebellum:8.47 brain stem:8.53 corpus callosum/glia:9.24 pineal gland:- peripheral nerve:8.17 spine:8.86 retina:- eye:- artery/aorta:8.22 vein:7.75 lymphnode:8.76 peripheral blood:- spleen:8.79 thymus:8.93 bone marrow:8.27 adipose:8.08 bone:- skin:7.98
CAGE cerebrum:1.12 cerebellum:- brain stem:0.99 corpus callosum/glia:0.91 pineal gland:0.62 peripheral nerve:- spine:1.79 retina:- eye:- artery/aorta:0.59 vein:1.23 lymphnode:0.38 peripheral blood:- spleen:0.25 thymus:0.42 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:0.87 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.54 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.03 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:87.40 prostate:90.10 ovary:- testis:21.60 heart:25.50 muscle:40.20 esophagus:342.80 stomach:85 intestine:- colon:67.80     liver/hepato:63.30        lung:29.30    bladder:- kidney:20.80 pituitary:347.90 thyroid/parathyroid:- adrenal gland:203.10 pancreas:80 breast:46.50 salivary:-
GeneChip uterus:8.50 placenta:8.25 prostate:8.34 ovary:8.37 testis:8.31 heart:7.73 muscle:7.52 esophagus:8.15 stomach:8.26 intestine:8.05 colon:7.44 liver/hepato:8.13 lung:8.35 bladder:- kidney:7.96 pituitary:8.90 thyroid/parathyroid:8.50 adrenal gland:8.52 pancreas:7.17 breast:8.37 salivary:8.31
CAGE uterus:0.42 placenta:0.24 prostate:0.15 ovary:0.32 testis:0.73 heart:0.26 muscle:0 esophagus:0.09 stomach:- intestine:0.33 colon:0.08     liver/hepato:0.26    lung:0.35 bladder:0.33 kidney:0.21 pituitary:0.84 thyroid/parathyroid:0.17 adrenal gland:- pancreas:0.94 breast:0.55 salivary:0
RNA-seq uterus:- placenta:- prostate:1.26 ovary:1.14 testis:0.80 heart:0.55 muscle:0 esophagus:- stomach:- intestine:- colon:1.95     liver/hepato:0.22        lung:1.35    bladder:- kidney:0.63 pituitary:- thyroid/parathyroid:0.64 adrenal gland:1.40 pancreas:- breast:0.80 salivary:-

Gene Information

IDs

Refseq ID NM_001134772
Gene ID 8675
Unigene ID Hs.307913
Probe set ID 221500_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000124222
GTEx ID ENSG00000124222

Orthologous Gene

Mouse[4]  NM_001102423, NM_001102424, NM_001102425, NM_172675
Rat[1]  NM_001108610, NM_001102424, NM_001102425, NM_172675

Chromosomal Region

20q13.32  [57,226,328  -  57,254,582]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9464276
9587053
11483580
11780052
11839770
12110575
12477932
14671302
15215310
15231748
15489334
15800843
17389686
17852734
18029348
18195106
19620288
19887622
19916794
20061437
20589833
20826815
20838585
21062889
21223469
21906983
22053931
23087324
23095209
23677696
24109596

Gene Ontology  (GO ID)

Biological Process

GO:0006891  intra-Golgi vesicle-mediated transport
GO:0006886  intracellular protein transport
GO:0042147  retrograde transport, endosome to Golgi

Cellular Component

GO:0005737  cytoplasm
GO:0005794  Golgi apparatus
GO:0000139  Golgi membrane
GO:0016021  integral to membrane
GO:0043231  intracellular membrane-bounded organelle
GO:0005730  nucleolus
GO:0031201  SNARE complex

Molecular Function

GO:0005515  protein binding
GO:0005484  SNAP receptor activity