serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)

Synonym

SERPINH1, RA-A47, AsTP3, clade H (heat shock protein 47), Rheumatoid arthritis-related antigen RA-A47, Arsenic-transactivated protein 3, Collagen-binding protein, 47 kDa heat shock protein, PIG14, Proliferation-inducing gene 14 protein, colligen, gp46, Serpin H1 precursor, CBP1, Colligin, HSP47, SERPINH2, CBP2

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:122.70

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:25.60

skin:9.60

GeneChip

cerebrum:6.05

cerebellum:5.77

brain stem:6.13

corpus callosum/glia:6.26

pineal gland:-

peripheral nerve:7.72

spine:6.58

retina:-

eye:-

artery/aorta:8.80

vein:8.81

lymphnode:7.23

peripheral blood:-

spleen:7.46

thymus:6.72

bone marrow:6.27

adipose:8.79

bone:-

skin:7.63

CAGE

cerebrum:2.15

cerebellum:-

brain stem:2.90

corpus callosum/glia:2.67

pineal gland:2.57

peripheral nerve:-

spine:3.27

retina:-

eye:-

artery/aorta:4.94

vein:3.69

lymphnode:3.20

peripheral blood:-

spleen:3.51

thymus:2.68

bone marrow:-

adipose:4.33

bone:-

skin:-

RNA-seq

cerebrum:1.88

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:6.51

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.60

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:7.30

prostate:-

ovary:-

testis:-

heart:51.10

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:4.90

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:8.90

breast:-

salivary:-

GeneChip

uterus:9.34

placenta:8.73

prostate:7.45

ovary:8.67

testis:7.04

heart:8.17

muscle:6.66

esophagus:7.18

stomach:7.61

intestine:7.81

colon:8.12

liver/hepato:6.70

lung:8.72

bladder:-

kidney:7.18

pituitary:6.46

thyroid/parathyroid:7.63

adrenal gland:8.13

pancreas:6.87

breast:8.14

salivary:6.55

CAGE

uterus:4.22

placenta:4.73

prostate:4.20

ovary:4.76

testis:3.45

heart:4.09

muscle:2.21

esophagus:3.75

stomach:-

intestine:3.01

colon:3.59

liver/hepato:2.98

lung:3.93

bladder:4.53

kidney:3.75

pituitary:2.24

thyroid/parathyroid:4.39

adrenal gland:-

pancreas:3.40

breast:4.93

salivary:2.39

RNA-seq

uterus:-

placenta:-

prostate:5.53

ovary:7.00

testis:5.75

heart:3.54

muscle:2.97

esophagus:-

stomach:-

intestine:-

colon:6.59

liver/hepato:3.04

lung:7.29

bladder:-

kidney:5.53

pituitary:-

thyroid/parathyroid:3.97

adrenal gland:5.55

pancreas:-

breast:5.76

salivary:-

IDs

Refseq ID	NM_001235
Gene ID	871
Unigene ID	Hs.596449
Probe set ID	207714_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000149257
GTEx ID	ENSG00000149257

Orthologous Gene

Mouse[12]	NM_001111043, NM_001111044, NM_009825
Rat [0]

GO:0032964	collagen biosynthetic process
GO:0030199	collagen fibril organization
GO:0030198	extracellular matrix organization
GO:0010951	negative regulation of endopeptidase activity
GO:0051604	protein maturation
GO:0030162	regulation of proteolysis
GO:0006986	response to unfolded protein

GO:0005783	endoplasmic reticulum
GO:0005788	endoplasmic reticulum lumen
GO:0005793	ER-Golgi intermediate compartment

GO:0005518	collagen binding
GO:0004867	serine-type endopeptidase inhibitor activity
GO:0051082	unfolded protein binding

serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function