starch binding domain 1

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Synonym

GENX-3414, genethonin 1, GENEX3414

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:30.80 cerebellum:12.60 brain stem:- corpus callosum/glia:87.50 pineal gland:- peripheral nerve:- spine:224.60 retina:- eye:29.40 artery/aorta:- vein:266.60 lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:78.70 adipose:403.30 bone:51.20 skin:72
GeneChip cerebrum:5.55 cerebellum:4.68 brain stem:5.95 corpus callosum/glia:5.57 pineal gland:- peripheral nerve:7.37 spine:5.99 retina:- eye:- artery/aorta:6.99 vein:8.05 lymphnode:5.04 peripheral blood:- spleen:4.84 thymus:4.22 bone marrow:6.91 adipose:8.21 bone:- skin:6.26
CAGE cerebrum:0.87 cerebellum:- brain stem:1.72 corpus callosum/glia:1.06 pineal gland:1.07 peripheral nerve:- spine:1.71 retina:- eye:- artery/aorta:3.35 vein:3.47 lymphnode:1.57 peripheral blood:- spleen:1.06 thymus:0.37 bone marrow:- adipose:3.58 bone:- skin:-
RNA-seq cerebrum:1.08 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.55 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:82 placenta:58.30 prostate:22.50 ovary:74.50 testis:17.30 heart:102.20 muscle:160.70 esophagus:- stomach:21.20 intestine:32.40 colon:50.90     liver/hepato:42.20        lung:34.20    bladder:125.60 kidney:62.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:97.80 breast:102.20 salivary:-
GeneChip uterus:6.08 placenta:6.73 prostate:6.40 ovary:6.26 testis:5.76 heart:7.45 muscle:9.50 esophagus:6.81 stomach:5.90 intestine:6.73 colon:6.31 liver/hepato:8.61 lung:6.71 bladder:- kidney:5.72 pituitary:4.93 thyroid/parathyroid:5.16 adrenal gland:5.65 pancreas:6.04 breast:6.60 salivary:5.38
CAGE uterus:2.48 placenta:3.42 prostate:3.29 ovary:2.61 testis:1.96 heart:3.91 muscle:4.75 esophagus:2.82 stomach:- intestine:3.52 colon:3.37     liver/hepato:4.57    lung:2.55 bladder:3.78 kidney:2.49 pituitary:0.90 thyroid/parathyroid:1.93 adrenal gland:- pancreas:2.76 breast:4.22 salivary:1.15
RNA-seq uterus:- placenta:- prostate:3.65 ovary:2.78 testis:3.08 heart:4.63 muscle:5.21 esophagus:- stomach:- intestine:- colon:3.66     liver/hepato:3.88        lung:3.92    bladder:- kidney:2.07 pituitary:- thyroid/parathyroid:4.04 adrenal gland:2.60 pancreas:- breast:5.71 salivary:-

Gene Information

IDs

Refseq ID NM_003943
Gene ID 8987
Unigene ID Hs.109590
Probe set ID 203986_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000118804
GTEx ID ENSG00000118804

Orthologous Gene

Mouse[1]  NM_175096
Rat[1]  NM_001013988

Chromosomal Region

4q21.1  [77,172,886  -  77,232,752]

Gene Family (Interpro ID)

IPR013784  Carbohydrate-binding-like fold
IPR002044  Glycoside hydrolase, carbohydrate-binding

Link to Pubmed  (Pubmed ID)

8828038
9794794
12477932
14702039
15231748
15489334
16303743
19915575
20562859
21893048

Gene Ontology  (GO ID)

Biological Process

GO:0006936  muscle contraction

Cellular Component

GO:0005887  integral to plasma membrane
GO:0016020  membrane

Molecular Function

GO:0005515  protein binding