LIM domain binding 2

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Synonym

LDB2, Carboxyl-terminal LIM domain-binding protein 1, CLIM-1, LIM domain binding 2, LDB1, LIM domain-binding protein 2, LIM domain-binding factor CLIM1, CLIM1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.90 cerebellum:4.11 brain stem:5.45 corpus callosum/glia:5.13 pineal gland:- peripheral nerve:7.34 spine:5.35 retina:- eye:- artery/aorta:7.11 vein:7.61 lymphnode:6.32 peripheral blood:- spleen:8.38 thymus:5.36 bone marrow:5.09 adipose:8.18 bone:- skin:6.71
CAGE cerebrum:4.14 cerebellum:- brain stem:2.88 corpus callosum/glia:3.01 pineal gland:4.25 peripheral nerve:- spine:3.48 retina:- eye:- artery/aorta:4.01 vein:4.29 lymphnode:3.36 peripheral blood:- spleen:5.16 thymus:2.02 bone marrow:- adipose:5.04 bone:- skin:-
RNA-seq cerebrum:0.52 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.76 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.66 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:8.32 placenta:7.20 prostate:6.47 ovary:7.32 testis:5.24 heart:8.05 muscle:5.91 esophagus:6.11 stomach:7.16 intestine:6.49 colon:6.44 liver/hepato:7.04 lung:9.17 bladder:- kidney:7.06 pituitary:5.48 thyroid/parathyroid:7.35 adrenal gland:7.67 pancreas:4.90 breast:7.49 salivary:5.69
CAGE uterus:5.39 placenta:4.03 prostate:4.18 ovary:4.23 testis:3.55 heart:4.32 muscle:3.54 esophagus:3.63 stomach:- intestine:2.97 colon:3.38     liver/hepato:3.78    lung:5.19 bladder:4.03 kidney:3.60 pituitary:2.82 thyroid/parathyroid:3.56 adrenal gland:- pancreas:2.90 breast:4.64 salivary:3.44
RNA-seq uterus:- placenta:- prostate:3.10 ovary:2.63 testis:2.92 heart:2.25 muscle:2.69 esophagus:- stomach:- intestine:- colon:4.17     liver/hepato:2.07        lung:5.14    bladder:- kidney:2.45 pituitary:- thyroid/parathyroid:2.49 adrenal gland:3.47 pancreas:- breast:2.96 salivary:-

Gene Information

IDs

Refseq ID NM_001130834
Gene ID 9079
Unigene ID -
Probe set ID 206481_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000169744
GTEx ID ENSG00000169744

Orthologous Gene

Mouse[2]  NM_001077398, NM_010698
Rat [0]  

Chromosomal Region

4p15.32  [16,503,164  -  16,900,432]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
8876198
8918878
9192866
9315627
9799849
9853615
9880598
10083735
10431247
10861853
12477932
14702039
15231748
15489334
16344560
19997623
20211142
20379614
23000965
23534349
23585552

Gene Ontology  (GO ID)

Biological Process

GO:0010669  epithelial structure maintenance
GO:0001942  hair follicle development
GO:0044089  positive regulation of cellular component biogenesis
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0035019  somatic stem cell maintenance

Cellular Component

GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0019899  enzyme binding
GO:0030274  LIM domain binding
GO:0003712  transcription cofactor activity