ATG12 autophagy related 12 homolog (S. cerevisiae)

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Synonym

ATG12 autophagy related 12 homolog (S. cerevisiae), APG12-like, HAPG12, APG12L, ATG12, Autophagy-related protein 12, APG12 autophagy 12-like (S. cerevisiae), APG12

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:26.10 cerebellum:12.60 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:61.30 spine:- retina:- eye:41.10 artery/aorta:119.90 vein:66.60 lymphnode:101.10 peripheral blood:18.20 spleen:37.80 thymus:38.70 bone marrow:59 adipose:- bone:12.80 skin:43.20
GeneChip cerebrum:6.01 cerebellum:6.01 brain stem:6.07 corpus callosum/glia:6.23 pineal gland:- peripheral nerve:5.85 spine:5.97 retina:- eye:- artery/aorta:5.70 vein:6.14 lymphnode:5.82 peripheral blood:- spleen:6.03 thymus:6.08 bone marrow:6.21 adipose:5.98 bone:- skin:5.68
CAGE cerebrum:3.97 cerebellum:- brain stem:4.18 corpus callosum/glia:3.81 pineal gland:3.88 peripheral nerve:- spine:4.23 retina:- eye:- artery/aorta:3.78 vein:3.76 lymphnode:3.64 peripheral blood:- spleen:3.67 thymus:3.56 bone marrow:- adipose:3.98 bone:- skin:-
RNA-seq cerebrum:3.17 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.92 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:100.20 placenta:51 prostate:22.50 ovary:- testis:30.30 heart:12.80 muscle:- esophagus:- stomach:21.20 intestine:- colon:-     liver/hepato:95        lung:9.80    bladder:125.60 kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:97.80 breast:18.60 salivary:-
GeneChip uterus:6.14 placenta:6.42 prostate:5.78 ovary:6.16 testis:5.91 heart:6.14 muscle:5.50 esophagus:5.98 stomach:5.89 intestine:5.95 colon:5.89 liver/hepato:6.06 lung:5.70 bladder:- kidney:5.60 pituitary:5.68 thyroid/parathyroid:5.45 adrenal gland:5.79 pancreas:5.68 breast:5.90 salivary:5.69
CAGE uterus:3.74 placenta:4.03 prostate:3.82 ovary:3.55 testis:3.83 heart:3.58 muscle:3.48 esophagus:3.74 stomach:- intestine:3.67 colon:3.53     liver/hepato:3.86    lung:3.63 bladder:4.01 kidney:3.39 pituitary:4.23 thyroid/parathyroid:3.57 adrenal gland:- pancreas:3.54 breast:3.97 salivary:3.13
RNA-seq uterus:- placenta:- prostate:3.62 ovary:3.24 testis:3.12 heart:2.42 muscle:2.24 esophagus:- stomach:- intestine:- colon:3.28     liver/hepato:2.86        lung:3.03    bladder:- kidney:2.88 pituitary:- thyroid/parathyroid:2.97 adrenal gland:3.21 pancreas:- breast:3.40 salivary:-

Gene Information

IDs

Refseq ID NM_004707
Gene ID 9140
Unigene ID Hs.264482
Probe set ID 204833_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000145782
GTEx ID ENSG00000145782

Orthologous Gene

Mouse[2]  NM_026217
Rat[1]  NM_001038495

Chromosomal Region

5q22.3  [115,163,893  -  115,177,555]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
9490301
9852036
11096062
11825910
11890701
12207896
12477932
12482611
12665549
12890687
14702039
15146197
15342556
15489334
16189514
16344560
17353931
17457038
18187620
19124466
19197948
19901552
20417604
20562859
20723759
21139048
21241894
21832049
21906983
22152474
22170153
22342342
23202584
23307622
24186333
24727585

Gene Ontology  (GO ID)

Biological Process

GO:0000045  autophagic vacuole formation
GO:0045087  innate immune response
GO:0032480  negative regulation of type I interferon production

Cellular Component

GO:0034045  pre-autophagosomal structure membrane
GO:0043234  protein complex

Molecular Function

GO:0005515  protein binding