cytospin B

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Synonym

spectrin domain with coiled-coils 1, HCMOGT-1, FLJ36955, SPECC1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:74.70 cerebellum:75.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:112.30 retina:237.30 eye:64.60 artery/aorta:- vein:- lymphnode:- peripheral blood:18.20 spleen:113.40 thymus:- bone marrow:39.40 adipose:- bone:- skin:52.80
GeneChip nodata
CAGE cerebrum:4.66 cerebellum:- brain stem:4.95 corpus callosum/glia:5.35 pineal gland:4.35 peripheral nerve:- spine:4.92 retina:- eye:- artery/aorta:4.06 vein:3.00 lymphnode:2.59 peripheral blood:- spleen:3.79 thymus:1.73 bone marrow:- adipose:3.62 bone:- skin:-
RNA-seq cerebrum:0.86 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.46 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.95 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:14.60 prostate:112.60 ovary:74.50 testis:82.20 heart:25.50 muscle:40.20 esophagus:- stomach:21.20 intestine:64.80 colon:25.40     liver/hepato:232.20        lung:58.70    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:111.50 salivary:-
GeneChip nodata
CAGE uterus:3.59 placenta:2.70 prostate:3.13 ovary:3.78 testis:3.81 heart:2.69 muscle:2.68 esophagus:2.86 stomach:- intestine:3.71 colon:3.69     liver/hepato:1.25    lung:3.06 bladder:2.79 kidney:2.74 pituitary:3.16 thyroid/parathyroid:2.46 adrenal gland:- pancreas:2.71 breast:2.91 salivary:2.72
RNA-seq uterus:- placenta:- prostate:0.02 ovary:0.18 testis:0.74 heart:0.22 muscle:0.28 esophagus:- stomach:- intestine:- colon:0.12     liver/hepato:0.04        lung:0.24    bladder:- kidney:0.02 pituitary:- thyroid/parathyroid:0.44 adrenal gland:1.14 pancreas:- breast:1.16 salivary:-

Gene Information

IDs

Refseq ID NM_152904
Gene ID 92521
Unigene ID Hs.431045
Probe set ID -
Ensembl ID ENSG00000128487
GTEx ID ENSG00000128487

Orthologous Gene

Mouse[1]  NM_001029936
Rat[1]  NM_001039017

Chromosomal Region

17p11.2  [19,912,614  -  20,222,339]

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding

Link to Pubmed  (Pubmed ID)

12477932
14702039
15087372
15146197
15342556
15489334
15602574
16344560
16751776
17081983
18763323
20237420
20360068
20379614
21139048
21311098
21906983
21963094
22170762
23251661
23398456
24163370
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion

Cellular Component

GO:0005634  nucleus