high mobility group nucleosomal binding domain 3

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Synonym

high mobility group nucleosomal binding domain 3, DKFZp686E20226, thyroid hormone receptor interactor 7, Thyroid receptor-interacting protein 7, PNAS-24, TRIP7, HMGN3, PNAS-25

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:106.70 cerebellum:12.60 brain stem:- corpus callosum/glia:87.50 pineal gland:296.70 peripheral nerve:92 spine:- retina:- eye:47 artery/aorta:- vein:66.60 lymphnode:111.20 peripheral blood:91.10 spleen:113.40 thymus:25.80 bone marrow:98.40 adipose:80.70 bone:12.80 skin:129.60
GeneChip cerebrum:8.81 cerebellum:9.02 brain stem:8.78 corpus callosum/glia:9.16 pineal gland:- peripheral nerve:8.60 spine:9.22 retina:- eye:- artery/aorta:8.95 vein:8.82 lymphnode:9.17 peripheral blood:- spleen:9.02 thymus:9.76 bone marrow:7.56 adipose:8.92 bone:- skin:8.56
CAGE cerebrum:4.71 cerebellum:- brain stem:4.74 corpus callosum/glia:4.09 pineal gland:5.65 peripheral nerve:- spine:5.08 retina:- eye:- artery/aorta:4.25 vein:3.89 lymphnode:4.11 peripheral blood:- spleen:3.92 thymus:3.85 bone marrow:- adipose:3.47 bone:- skin:-
RNA-seq cerebrum:3.99 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.03 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.89 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:100.20 placenta:51 prostate:157.70 ovary:- testis:86.50 heart:114.90 muscle:180.80 esophagus:- stomach:127.50 intestine:64.80 colon:67.80     liver/hepato:126.70        lung:156.40    bladder:- kidney:104 pituitary:116 thyroid/parathyroid:163.70 adrenal gland:101.60 pancreas:231.20 breast:92.90 salivary:-
GeneChip uterus:9.36 placenta:9.34 prostate:9.49 ovary:9.91 testis:9.43 heart:9.30 muscle:9.02 esophagus:9.14 stomach:9.17 intestine:9.08 colon:7.95 liver/hepato:9.09 lung:9.27 bladder:- kidney:9.53 pituitary:9.95 thyroid/parathyroid:9.67 adrenal gland:9.55 pancreas:8.32 breast:8.64 salivary:9.26
CAGE uterus:4.20 placenta:4.42 prostate:3.93 ovary:3.91 testis:4.23 heart:4.70 muscle:4.44 esophagus:4.12 stomach:- intestine:3.90 colon:4.02     liver/hepato:3.77    lung:4.45 bladder:3.75 kidney:4.58 pituitary:5.06 thyroid/parathyroid:4.14 adrenal gland:- pancreas:4.19 breast:4.08 salivary:4.65
RNA-seq uterus:- placenta:- prostate:3.82 ovary:5.23 testis:5.11 heart:2.64 muscle:0.00 esophagus:- stomach:- intestine:- colon:3.38     liver/hepato:3.15        lung:3.64    bladder:- kidney:4.66 pituitary:- thyroid/parathyroid:4.94 adrenal gland:4.06 pancreas:- breast:4.38 salivary:-

Gene Information

IDs

Refseq ID NM_004242
Gene ID 9324
Unigene ID Hs.77558
Probe set ID 209377_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000118418
GTEx ID ENSG00000118418

Orthologous Gene

Mouse[4]  NM_026122, NM_175074
Rat[4]  NM_026122, NM_175074

Chromosomal Region

6q14.1  [79,910,962  -  79,944,406]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7776974
11356838
12033773
12477932
14574404
14702039
15489334
15604093
17081983
17474147
18029348
19651901
21044950
21906983
21947420
21963094
23000965
23602568
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0016568  chromatin modification
GO:0051091  positive regulation of transcription factor activity
GO:0045944  positive regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0000785  chromatin
GO:0005737  cytoplasm
GO:0005730  nucleolus
GO:0005634  nucleus

Molecular Function

GO:0031492  nucleosomal DNA binding
GO:0046966  thyroid hormone receptor binding