USP6 N-terminal like

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Synonym

TRE2NL, RN-tre, Related to the N-terminus of tre, RNTRE, KIAA0019, USP6 N-terminal-like protein, USP6 N-terminal like, USP6NL

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:64.60 artery/aorta:- vein:133.30 lymphnode:91 peripheral blood:- spleen:18.90 thymus:12.90 bone marrow:19.70 adipose:- bone:12.80 skin:33.60
GeneChip cerebrum:3.34 cerebellum:3.21 brain stem:3.53 corpus callosum/glia:3.53 pineal gland:- peripheral nerve:4.24 spine:3.70 retina:- eye:- artery/aorta:3.15 vein:3.37 lymphnode:3.81 peripheral blood:- spleen:4.36 thymus:3.42 bone marrow:3.19 adipose:3.40 bone:- skin:4.27
CAGE cerebrum:2.16 cerebellum:- brain stem:2.52 corpus callosum/glia:2.70 pineal gland:2.47 peripheral nerve:- spine:2.78 retina:- eye:- artery/aorta:2.64 vein:2.84 lymphnode:3.05 peripheral blood:- spleen:3.25 thymus:2.64 bone marrow:- adipose:1.97 bone:- skin:-
RNA-seq cerebrum:0.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.92 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.56 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:63.80 placenta:47.40 prostate:33.80 ovary:- testis:51.90 heart:12.80 muscle:- esophagus:- stomach:42.50 intestine:- colon:33.90     liver/hepato:-        lung:24.40    bladder:125.60 kidney:10.40 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:71.10 breast:65.10 salivary:-
GeneChip uterus:3.83 placenta:5.06 prostate:3.80 ovary:4.13 testis:5.97 heart:3.37 muscle:3.06 esophagus:4.88 stomach:3.35 intestine:3.35 colon:3.43 liver/hepato:3.77 lung:3.42 bladder:- kidney:3.20 pituitary:3.46 thyroid/parathyroid:3.21 adrenal gland:3.60 pancreas:3.24 breast:3.90 salivary:3.89
CAGE uterus:2.21 placenta:2.96 prostate:2.12 ovary:2.35 testis:3.41 heart:1.96 muscle:1.43 esophagus:2.87 stomach:- intestine:2.49 colon:2.44     liver/hepato:2.25    lung:2.41 bladder:2.17 kidney:1.94 pituitary:2.12 thyroid/parathyroid:1.93 adrenal gland:- pancreas:2.48 breast:2.69 salivary:2.50
RNA-seq uterus:- placenta:- prostate:0.45 ovary:0.84 testis:2.58 heart:0.63 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.31     liver/hepato:0.75        lung:1.04    bladder:- kidney:0.74 pituitary:- thyroid/parathyroid:1.26 adrenal gland:1.08 pancreas:- breast:1.19 salivary:-

Gene Information

IDs

Refseq ID NM_014688
Gene ID 9712
Unigene ID Hs.498661
Probe set ID 204761_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000148429
GTEx ID ENSG00000148429

Orthologous Gene

Mouse[2]  NM_001080548, NM_181399
Rat[1]  NM_001106120, NM_181399

Chromosomal Region

10p14  [11,502,509  -  11,653,753]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7584026
7584028
8700515
8700527
8889548
11076863
11099046
12399475
12477932
14521938
15144186
15152255
15489334
15489336
16381901
17081983
17371873
17684057
19077034
20379614
21139048
21832049
23000965
23251661
24550385

Gene Ontology  (GO ID)

Biological Process

GO:0007030  Golgi organization
GO:0032851  positive regulation of Rab GTPase activity

Cellular Component

GO:0016023  cytoplasmic membrane-bounded vesicle
GO:0031410  cytoplasmic vesicle
GO:0005794  Golgi apparatus

Molecular Function

GO:0005097  Rab GTPase activator activity