heterogeneous nuclear ribonucleoprotein D-like

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Synonym

JKTBP2, JKTBP, HNRNP, laAUF1, heterogeneous nuclear ribonucleoprotein D-like, HNRPDL

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:586.70

cerebellum:768.20

brain stem:-

corpus callosum/glia:554.10

pineal gland:148.30

peripheral nerve:276

spine:561.50

retina:237.30

eye:299.70

artery/aorta:60

vein:-

lymphnode:424.60

peripheral blood:309.70

spleen:1153.30

thymus:850.30

bone marrow:177.10

adipose:282.30

bone:255.90

skin:177.60

GeneChip

nodata

CAGE

cerebrum:5.73

cerebellum:-

brain stem:5.86

corpus callosum/glia:5.67

pineal gland:5.33

peripheral nerve:-

spine:6.03

retina:-

eye:-

artery/aorta:5.38

vein:5.31

lymphnode:5.39

peripheral blood:-

spleen:5.36

thymus:5.24

bone marrow:-

adipose:5.08

bone:-

skin:-

RNA-seq

cerebrum:1.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.87

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.98

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:856.60

placenta:222.20

prostate:371.70

ovary:186.30

testis:220.60

heart:306.50

muscle:160.70

esophagus:-

stomach:318.60

intestine:1069.10

colon:169.60

liver/hepato:306.10

lung:391

bladder:1004.90

kidney:363.90

pituitary:463.90

thyroid/parathyroid:327.50

adrenal gland:761.80

pancreas:133.40

breast:148.70

salivary:-

GeneChip

nodata

CAGE

uterus:5.49

placenta:5.30

prostate:5.22

ovary:5.67

testis:5.19

heart:5.37

muscle:5.72

esophagus:5.18

stomach:-

intestine:5.17

colon:4.98

liver/hepato:4.98

lung:5.41

bladder:5.35

kidney:5.12

pituitary:5.48

thyroid/parathyroid:4.65

adrenal gland:-

pancreas:4.77

breast:4.96

salivary:4.85

RNA-seq

uterus:-

placenta:-

prostate:3.34

ovary:2.72

testis:2.59

heart:1.05

muscle:3.12

esophagus:-

stomach:-

intestine:-

colon:2.96

liver/hepato:1.92

lung:2.54

bladder:-

kidney:3.00

pituitary:-

thyroid/parathyroid:2.69

adrenal gland:1.39

pancreas:-

breast:1.99

salivary:-

IDs

Refseq ID	NR_003249
Gene ID	9987
Unigene ID	Hs.527105
Probe set ID	-
Ensembl ID	-
GTEx ID	-

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

4q21.22 [83,343,717 - 83,351,294]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000504

RNA recognition motif, RNP-1

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0010468	regulation of gene expression
GO:0006355	regulation of transcription, DNA-dependent
GO:0006396	RNA processing
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005737	cytoplasm
GO:0005634	nucleus
GO:0005681	spliceosomal complex

Molecular Function

GO:0003677	DNA binding
GO:0003690	double-stranded DNA binding
GO:0000166	nucleotide binding
GO:0008143	poly(A) RNA binding
GO:0034046	poly(G) RNA binding
GO:0003723	RNA binding
GO:0003697	single-stranded DNA binding