sorcin

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Synonym

Sor, 2210417O06Rik, Sorcin, Sri, sorcin

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.56 cerebellum:9.26 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.92 spine:8.97 retina:6.81 eye:8.67 artery/aorta:- vein:9.74 lymphnode:10.85 peripheral blood:- spleen:10.47 thymus:- bone marrow:10.70 adipose:9.40 bone:10.54 skin:8.91
CAGE cerebrum:4.33 cerebellum:- brain stem:4.39 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.73 retina:- eye:- artery/aorta:4.68 vein:- lymphnode:5.31 peripheral blood:- spleen:4.86 thymus:4.55 bone marrow:- adipose:- bone:5.23 skin:4.00
RNA-seq cerebrum:12.67 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:9.94 placenta:11.72 prostate:9.75 ovary:9.61 testis:5.95 heart:8.72 muscle:8.13 esophagus:- stomach:11.49 intestine:11.53 colon:- liver/hepato:8.76 lung:10.19 bladder:9.50 kidney:9.91 pituitary:9.25 thyroid/parathyroid:- adrenal gland:8.66 pancreas:8.13 breast:9.21 salivary:7.93
CAGE uterus:4.91 placenta:5.91 prostate:4.04 ovary:4.36 testis:2.51 heart:- muscle:- esophagus:- stomach:6.21 intestine:5.57 colon:5.77     liver/hepato:3.89    lung:5.10 bladder:4.60 kidney:- pituitary:4.37 thyroid/parathyroid:- adrenal gland:4.27 pancreas:3.86 breast:4.07 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:4.05 esophagus:- stomach:- intestine:- colon:-     liver/hepato:6.10        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001080974
Gene ID 109552
Unigene ID -
Probe set ID 1450878_at  [Mouse430_2]
Ensembl ID ENSMUSG00000003161

Orthologous Gene

Human[4]  NM_003130, NM_198901
Rat[4]  NM_003130, NM_198901

Chromosomal Region

-

Gene Family (Interpro ID)

IPR002048  Calcium-binding EF-hand
IPR018249  EF-HAND 2

Link to Pubmed  (Pubmed ID)

1627461
1783386
8543148
8889548
10349636
10922068
11042159
11076861
11217851
12466851
12477932
12754254
12824171
12925238
14610273
14644162
15489334
15872312
16141072
16141073
16204356
17130302
17707398
21677750
22326846
22338092
22928916

Gene Ontology  (GO ID)

Biological Process

GO:0006816  calcium ion transport
GO:0042994  cytoplasmic sequestering of transcription factor
GO:0010459  negative regulation of heart rate
GO:0060315  negative regulation of ryanodine-sensitive calcium-release channel activity
GO:0051281  positive regulation of release of sequestered calcium ion into cytosol
GO:0051924  regulation of calcium ion transport

Cellular Component

GO:0042584  chromaffin granule membrane
GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0005789  endoplasmic reticulum membrane
GO:0005622  intracellular
GO:0016020  membrane
GO:0005886  plasma membrane
GO:0016529  sarcoplasmic reticulum
GO:0031982  vesicle
GO:0030018  Z disc

Molecular Function

GO:0005509  calcium ion binding
GO:0046872  metal ion binding
GO:0002020  protease binding
GO:0005515  protein binding
GO:0046982  protein heterodimerization activity
GO:0070491  transcription repressor binding