structure specific recognition protein 1

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Synonym

Structure-specific recognition protein 1, structure specific recognition protein 1, Hmgox, T160, Hmg1-rs1, C81323, FACT complex subunit SSRP1, Ssrp1, Hmgi-rs3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:208.40 cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:95.50 spine:94.60 retina:289.30 eye:235.50 artery/aorta:- vein:- lymphnode:54 peripheral blood:474.40 spleen:65.80 thymus:128.40 bone marrow:282.10 adipose:- bone:225.40 skin:190
GeneChip cerebrum:9.61 cerebellum:9.72 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.12 spine:9.28 retina:9.36 eye:9.25 artery/aorta:- vein:9.98 lymphnode:10.64 peripheral blood:- spleen:10.79 thymus:- bone marrow:11.43 adipose:9.39 bone:11.10 skin:9.74
CAGE cerebrum:3.59 cerebellum:- brain stem:3.39 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.28 retina:- eye:- artery/aorta:2.94 vein:- lymphnode:3.45 peripheral blood:- spleen:4.04 thymus:3.81 bone marrow:- adipose:- bone:3.94 skin:3.10
RNA-seq cerebrum:11.27 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:130.90 placenta:96.70 prostate:- ovary:103.40 testis:118.20 heart:148.80 muscle:71 esophagus:- stomach:163.60 intestine:- colon:-     liver/hepato:90.50        lung:90.40    bladder:- kidney:153.10 pituitary:477.90 thyroid/parathyroid:- adrenal gland:- pancreas:168.90 breast:205.70 salivary:54
GeneChip uterus:10.61 placenta:9.33 prostate:9.85 ovary:10.44 testis:9.76 heart:8.92 muscle:9.01 esophagus:- stomach:9.85 intestine:9.97 colon:- liver/hepato:9.17 lung:9.91 bladder:9.61 kidney:9.43 pituitary:10.02 thyroid/parathyroid:- adrenal gland:9.56 pancreas:9.50 breast:9.75 salivary:9.64
CAGE uterus:3.72 placenta:3.50 prostate:3.30 ovary:3.53 testis:4.59 heart:- muscle:- esophagus:- stomach:3.32 intestine:3.34 colon:3.18     liver/hepato:3.20    lung:3.46 bladder:3.22 kidney:- pituitary:3.74 thyroid/parathyroid:- adrenal gland:3.44 pancreas:2.83 breast:3.37 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:4.11 esophagus:- stomach:- intestine:- colon:-     liver/hepato:7.75        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001136081
Gene ID 20833
Unigene ID Mm.219793
Probe set ID 1426788_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000027067

Orthologous Gene

Human[2]  NM_003146
Rat [0]  

Chromosomal Region

2D  [84,877,355  -  84,887,266]

Gene Family (Interpro ID)

IPR000910  High mobility group, HMG1/HMG2
IPR000135  High mobility group, HMG1/HMG2, subgroup
IPR009071  High mobility group, superfamily

Link to Pubmed  (Pubmed ID)

1678855
8093609
8268661
9300827
9367632
9885975
10349636
10725249
10922068
11042159
11076861
11217851
11404013
12466851
12477932
12861016
12904583
14610273
15489334
15618518
15782199
16141072
16141073
17967808
18287559
18799693
20059953
20362542
20412781
20932939
21589869
21677750
22083510
22252316
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0006281  DNA repair
GO:0006260  DNA replication
GO:0006355  regulation of transcription, DNA-dependent
GO:0006974  response to DNA damage stimulus
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005694  chromosome
GO:0005737  cytoplasm
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0003677  DNA binding