tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)

 jump to detail

Synonym

5230400J09Rik, Tyw3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:31.30 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:15.20 artery/aorta:168.80 vein:- lymphnode:- peripheral blood:- spleen:- thymus:9.90 bone marrow:- adipose:- bone:25 skin:15.80
GeneChip nodata
CAGE cerebrum:2.38 cerebellum:- brain stem:2.31 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.23 retina:- eye:- artery/aorta:1.62 vein:- lymphnode:1.94 peripheral blood:- spleen:1.60 thymus:2.03 bone marrow:- adipose:- bone:0.63 skin:1.53
RNA-seq cerebrum:1.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:87.20 placenta:27.60 prostate:- ovary:- testis:- heart:37.20 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:27.20        lung:20.10    bladder:- kidney:24.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:1.93 placenta:1.29 prostate:1.29 ovary:1.96 testis:0.99 heart:- muscle:- esophagus:- stomach:0.67 intestine:0.95 colon:0.82     liver/hepato:1.22    lung:1.82 bladder:1.54 kidney:- pituitary:1.22 thyroid/parathyroid:- adrenal gland:1.58 pancreas:0 breast:1.48 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.09 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0.84        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_172474
Gene ID 209584
Unigene ID Mm.347513
Probe set ID -
Ensembl ID ENSMUSG00000047583

Orthologous Gene

Human[2]  NM_001162916, NM_138467
Rat[2]  NM_001162916, NM_138467

Chromosomal Region

3H4  [154,239,484  -  154,260,068]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
12466851
12477932
12520002
14610273
15489334
16141072
16141073
21267068

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0032259  methylation
GO:0008033  tRNA processing

Cellular Component

GO:0005575  cellular_component

Molecular Function

GO:0008168  methyltransferase activity
GO:0003674  molecular_function
GO:0016740  transferase activity