tumor necrosis factor alpha induced protein 6

 jump to detail

Synonym

Tnfip6, Tnfaip6, TSG-6, tumor necrosis factor alpha induced protein 6, Tsg6, TNF-stimulated gene 6 protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.60 cerebellum:4.36 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:3.95 spine:5.73 retina:3.99 eye:4.53 artery/aorta:- vein:4.83 lymphnode:3.70 peripheral blood:- spleen:3.70 thymus:- bone marrow:3.84 adipose:4 bone:4.11 skin:4.06
CAGE cerebrum:3.05 cerebellum:- brain stem:4.09 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.48 retina:- eye:- artery/aorta:2.07 vein:- lymphnode:3.10 peripheral blood:- spleen:0.41 thymus:0.49 bone marrow:- adipose:- bone:0.63 skin:2.43
RNA-seq cerebrum:2.84 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:29.60 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.73 placenta:3.64 prostate:3.86 ovary:3.96 testis:3.91 heart:4.02 muscle:4.18 esophagus:- stomach:3.85 intestine:3.87 colon:- liver/hepato:4 lung:3.98 bladder:3.82 kidney:3.69 pituitary:3.61 thyroid/parathyroid:- adrenal gland:4.10 pancreas:3.73 breast:4.28 salivary:4.12
CAGE uterus:2.86 placenta:0.37 prostate:0.84 ovary:2.31 testis:0.45 heart:- muscle:- esophagus:- stomach:1.07 intestine:1.05 colon:0.93     liver/hepato:0.64    lung:1.42 bladder:1.01 kidney:- pituitary:0 thyroid/parathyroid:- adrenal gland:1.80 pancreas:1.30 breast:2.07 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.38 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_009398
Gene ID 21930
Unigene ID Mm.350927
Probe set ID 1418424_at  [Mouse430_2]
Ensembl ID ENSMUSG00000053475

Orthologous Gene

Human[2]  NM_007115
Rat[2]  NM_007115

Chromosomal Region

-

Gene Family (Interpro ID)

IPR016187  C-type lectin fold
IPR016186  C-type lectin-like
IPR000538  Link

Link to Pubmed  (Pubmed ID)

9427551
10349636
11042159
11076861
11217851
12011075
12466851
12477932
12586778
12668637
12959984
14610273
14756057
15060082
15457471
15489334
15699048
16141072
16141073
16467113
18256330
18586671
18979174
21267068
21566135
23118230
23129777
23166324
23921952

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion

Molecular Function

GO:0005540  hyaluronic acid binding