solute carrier family 6 (neurotransmitter transporter), member 18

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Synonym

Xt2, D630001K16Rik, Xtrp2, Sodium- and chloride-dependent transporter XTRP2, XT2, Solute carrier family 6 member 18, Slc6a18

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.33 cerebellum:5.45 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.29 spine:4.67 retina:4.42 eye:4.61 artery/aorta:- vein:4.33 lymphnode:4 peripheral blood:- spleen:4.43 thymus:- bone marrow:4.23 adipose:4.45 bone:4.36 skin:4.53
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:- lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:- bone:0.63 skin:0
RNA-seq cerebrum:2.75 cerebellum:2.75 brain stem:2.75 corpus callosum/glia:2.75 pineal gland:2.75 peripheral nerve:2.75 spine:2.75 retina:2.75 eye:2.75 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.18 placenta:4.29 prostate:4.55 ovary:4.09 testis:4.38 heart:4.97 muscle:4.30 esophagus:- stomach:4.38 intestine:4.51 colon:- liver/hepato:4.58 lung:4.16 bladder:4.18 kidney:10.24 pituitary:4.30 thyroid/parathyroid:- adrenal gland:4.74 pancreas:4.91 breast:4.39 salivary:4.74
CAGE uterus:0 placenta:0.49 prostate:0 ovary:0 testis:0 heart:- muscle:- esophagus:- stomach:0 intestine:0.72 colon:0.23     liver/hepato:0    lung:0 bladder:0 kidney:- pituitary:0 thyroid/parathyroid:- adrenal gland:0 pancreas:0 breast:0 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001040692
Gene ID 22598
Unigene ID -
Probe set ID 1451879_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000021612

Orthologous Gene

Human[1]  NM_182632
Rat [0]  

Chromosomal Region

13C1  [73,799,198  -  73,815,471]

Gene Family (Interpro ID)

IPR000175  Sodium:neurotransmitter symporter
IPR002438  Sodium:neurotransmitter symporter, orphan

Link to Pubmed  (Pubmed ID)

9932288
10349636
11042159
11076861
11217851
12466851
12477932
15121838
15489334
16125675
16141072
16141073
16174864
16602821
17167413
19478081
19521566
21267068

Gene Ontology  (GO ID)

Biological Process

GO:0006865  amino acid transport
GO:0006836  neurotransmitter transport
GO:0006810  transport

Cellular Component

GO:0016021  integral to membrane
GO:0005887  integral to plasma membrane
GO:0016020  membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005328  neurotransmitter:sodium symporter activity
GO:0015293  symporter activity
GO:0005215  transporter activity