Y box protein 1

Synonym

1700102N10Rik, DBPB, Y box protein 1, EFI-A, CCAAT-binding transcription factor I subunit A, Enhancer factor I subunit A, DNA-binding protein B, YB-1, MSY1, MGC118070, Yb1, Nsep1, Ybx1, Nuclease sensitive element-binding protein 1, Y-box-binding protein 1, mYB-1a, C79409, Y-box transcription factor, dbpB, DNA binding protein B, Msy-1, Msy1, EF1A

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:140.70

cerebellum:18.40

brain stem:-

corpus callosum/glia:-

pineal gland:257.80

peripheral nerve:76.40

spine:94.60

retina:225

eye:288.70

artery/aorta:-

vein:-

lymphnode:32.40

peripheral blood:100.60

spleen:105.30

thymus:207.50

bone marrow:961.60

adipose:-

bone:250.50

skin:47.50

GeneChip

cerebrum:10.83

cerebellum:10.79

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:10.66

spine:10.38

retina:10.85

eye:11.31

artery/aorta:-

vein:11.77

lymphnode:12.20

peripheral blood:-

spleen:12.10

thymus:-

bone marrow:12.17

adipose:12.05

bone:12.10

skin:11.85

CAGE

cerebrum:2.92

cerebellum:-

brain stem:2.17

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:2.21

retina:-

eye:-

artery/aorta:3.83

vein:-

lymphnode:3.45

peripheral blood:-

spleen:3.17

thymus:3.17

bone marrow:-

adipose:-

bone:4.17

skin:3.44

RNA-seq

cerebrum:35.21

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:261.70

placenta:41.40

prostate:61.80

ovary:80.40

testis:243.90

heart:186

muscle:355.10

esophagus:-

stomach:-

intestine:147.90

colon:440.60

liver/hepato:90.50

lung:421.80

bladder:-

kidney:241.80

pituitary:51.70

thyroid/parathyroid:449.90

adrenal gland:-

pancreas:253.30

breast:479.90

salivary:324

GeneChip

uterus:12.38

placenta:10.83

prostate:11.60

ovary:12.72

testis:13.13

heart:12.82

muscle:12.47

esophagus:-

stomach:12.24

intestine:12.54

colon:-

liver/hepato:11.40

lung:12.61

bladder:12.29

kidney:12.96

pituitary:11.56

thyroid/parathyroid:-

adrenal gland:11.87

pancreas:11.11

breast:12

salivary:11.20

CAGE

uterus:3.38

placenta:3.16

prostate:2.89

ovary:3.25

testis:6.59

heart:-

muscle:-

esophagus:-

stomach:3.39

intestine:3.40

colon:3.57

liver/hepato:2.90

lung:3.48

bladder:3.63

kidney:-

pituitary:3.10

thyroid/parathyroid:-

adrenal gland:3.34

pancreas:3.45

breast:3.31

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:134.52

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:54.49

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_011732
Gene ID	22608
Unigene ID	Mm.258204
Probe set ID	1418624_at [Mouse430_2]
Ensembl ID	ENSMUSG00000028639

Orthologous Gene

Human[2]	NM_004559
Rat[2]	NM_004559

Chromosomal Region

Gene Family (Interpro ID)

IPR011129	Cold shock protein
IPR002059	Cold-shock protein, DNA-binding

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0070934	CRD-mediated mRNA stabilization
GO:0001701	in utero embryonic development
GO:0006397	mRNA processing
GO:0043066	negative regulation of apoptosis
GO:0046627	negative regulation of insulin receptor signaling pathway
GO:0051154	negative regulation of striated muscle cell differentiation
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0051781	positive regulation of cell division
GO:0008284	positive regulation of cell proliferation
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-dependent
GO:0008380	RNA splicing
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0070937	CRD-mediated mRNA stability complex
GO:0005737	cytoplasm
GO:0030425	dendrite
GO:0005576	extracellular region
GO:0071204	histone pre-mRNA 3'end processing complex
GO:0043231	intracellular membrane-bounded organelle
GO:0005634	nucleus
GO:0048471	perinuclear region of cytoplasm
GO:0030529	ribonucleoprotein complex
GO:0010494	stress granule
GO:0005689	U12-type spliceosomal complex

Molecular Function

GO:0003677	DNA binding
GO:0003729	mRNA binding
GO:0003676	nucleic acid binding
GO:0002039	p53 binding
GO:0005515	protein binding
GO:0003723	RNA binding
GO:0043565	sequence-specific DNA binding
GO:0003697	single-stranded DNA binding
GO:0008134	transcription factor binding

Y box protein 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function