KDM3B lysine (K)-specific demethylase 3B

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Synonym

mKIAA1082, Kiaa1082, Jumonji domain-containing protein 1B, Jhdm2b, Jmjd1b, jumonji domain containing 1B, 5830462I21Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.50 cerebellum:8.67 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:7.95 spine:8.11 retina:9.47 eye:8.78 artery/aorta:- vein:9 lymphnode:9.98 peripheral blood:- spleen:9.74 thymus:- bone marrow:9.80 adipose:8.36 bone:9.45 skin:8.79
CAGE cerebrum:2.31 cerebellum:- brain stem:1.67 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.06 retina:- eye:- artery/aorta:1.73 vein:- lymphnode:1.86 peripheral blood:- spleen:2.06 thymus:2.22 bone marrow:- adipose:- bone:2.37 skin:1.89
RNA-seq cerebrum:5.56 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:9.27 placenta:8.50 prostate:8.76 ovary:8.94 testis:7.88 heart:8.40 muscle:8.44 esophagus:- stomach:8.61 intestine:8.78 colon:- liver/hepato:8.19 lung:8.93 bladder:8.73 kidney:7.96 pituitary:8.89 thyroid/parathyroid:- adrenal gland:8.78 pancreas:7.74 breast:8.76 salivary:8.28
CAGE uterus:2.18 placenta:1.75 prostate:2.24 ovary:2.13 testis:0.75 heart:- muscle:- esophagus:- stomach:1.75 intestine:1.80 colon:2.19     liver/hepato:1.64    lung:2.31 bladder:2.21 kidney:- pituitary:2.29 thyroid/parathyroid:- adrenal gland:1.89 pancreas:1.84 breast:2.01 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:6.40 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.13        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001081256
Gene ID 277250
Unigene ID -
Probe set ID 1428320_at  [Mouse430_2]
Ensembl ID ENSMUSG00000038773

Orthologous Gene

Human[2]  NM_016604
Rat[2]  NM_016604

Chromosomal Region

-

Gene Family (Interpro ID)

IPR003347  Transcription factor jumonji/aspartyl beta-hydroxylase

Link to Pubmed  (Pubmed ID)

10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
12520002
14610273
14621295
15226823
15489334
15618518
16141072
16141073
16602821
17967808
18022353
18799693
18986647
20412781
21267068
24183668

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0016568  chromatin modification
GO:0055114  oxidation reduction
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0046872  metal ion binding
GO:0003674  molecular_function
GO:0016491  oxidoreductase activity
GO:0016702  oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen