tetraspanin 6

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Synonym

tetraspanin 6, Transmembrane 4 superfamily member 6, AI316786, T245, Tm4sf6, Tspan-6, TSPAN-6, MGC117923, Tm4sf, Tetraspanin-6, Tspan6

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:50.40 cerebellum:55.30 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:57.30 spine:- retina:64.30 eye:38 artery/aorta:- vein:- lymphnode:- peripheral blood:28.80 spleen:- thymus:9.90 bone marrow:- adipose:- bone:62.60 skin:63.30
GeneChip cerebrum:7.65 cerebellum:7 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:6.86 spine:7.82 retina:8.08 eye:8.76 artery/aorta:- vein:9.20 lymphnode:6.39 peripheral blood:- spleen:6.36 thymus:- bone marrow:6.18 adipose:7.80 bone:6.63 skin:7.30
CAGE cerebrum:2.86 cerebellum:- brain stem:3.19 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.95 retina:- eye:- artery/aorta:2.45 vein:- lymphnode:1.78 peripheral blood:- spleen:1.52 thymus:2.19 bone marrow:- adipose:- bone:1.84 skin:2.58
RNA-seq cerebrum:1.81 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:174.50 placenta:27.60 prostate:123.50 ovary:46 testis:103.50 heart:37.20 muscle:35.50 esophagus:- stomach:32.70 intestine:- colon:-     liver/hepato:9.10        lung:30.10    bladder:- kidney:32.20 pituitary:51.70 thyroid/parathyroid:- adrenal gland:- pancreas:75.10 breast:71.80 salivary:-
GeneChip uterus:7.33 placenta:6.89 prostate:7.15 ovary:8.67 testis:5.42 heart:7.15 muscle:6.46 esophagus:- stomach:7.38 intestine:6.90 colon:- liver/hepato:5.58 lung:7.41 bladder:10.37 kidney:6.79 pituitary:7.59 thyroid/parathyroid:- adrenal gland:7.95 pancreas:6.08 breast:7.18 salivary:7.21
CAGE uterus:2.60 placenta:2.51 prostate:1.65 ovary:3.66 testis:1.18 heart:- muscle:- esophagus:- stomach:2.66 intestine:1.22 colon:1.85     liver/hepato:0.47    lung:2.51 bladder:4.36 kidney:- pituitary:3.03 thyroid/parathyroid:- adrenal gland:3.24 pancreas:0 breast:2.34 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.72 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_019656
Gene ID 56496
Unigene ID Mm.46701
Probe set ID 1416872_at  [Mouse430_2]
Ensembl ID ENSMUSG00000067377

Orthologous Gene

Human[2]  NM_003270
Rat[1]  NM_001100672

Chromosomal Region

-

Gene Family (Interpro ID)

IPR018499  Tetraspanin
IPR000301  Tetraspanin, subgroup

Link to Pubmed  (Pubmed ID)

9714763
10349636
10922068
11042159
11076861
11217851
12466851
12477932
15703188
16141072
16141073
16602821
18291621
18554416
21267068
21947380
24003143

Gene Ontology  (GO ID)

Biological Process

GO:0043123  positive regulation of I-kappaB kinase/NF-kappaB cascade
GO:0007165  signal transduction

Cellular Component

GO:0016021  integral to membrane
GO:0016020  membrane

Molecular Function

GO:0004871  signal transducer activity